RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TUT1Q9H6E5 874 aaKnown RBP19.32■□□□□ 0.68
TRIM13-208ENST00000478111 LY9Q9HBG7 655 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 TELO2Q9Y4R8 837 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 EFCAB14O75071 495 aa19.31■□□□□ 0.68
TRIM13-208ENST00000478111 LGR5O75473 907 aa19.31■□□□□ 0.68
TRIM13-208ENST00000478111 SKIV2LQ15477 1246 aaKnown RBP19.31■□□□□ 0.68
TRIM13-208ENST00000478111 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRIM13-208ENST00000478111 OSBPL7Q9BZF2 842 aa19.31■□□□□ 0.68
TRIM13-208ENST00000478111 RNPEPQ9H4A4 650 aa19.31■□□□□ 0.68
TRIM13-208ENST00000478111 RTEL1Q9NZ71 1219 aa19.31■□□□□ 0.68
TRIM13-208ENST00000478111 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
TRIM13-208ENST00000478111 C17orf102A2RUQ5 167 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 MEIS2O14770 477 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 TREHO43280 583 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 STAM2O75886 525 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 SMIM10L2AP0DMW4 78 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 SMIM10L2BP0DMW5 78 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 THPOP40225 353 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 ERVK-21P61565 698 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 GNPTABQ3T906 1256 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 USP17L6PQ6QN14 398 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 CYFIP1Q7L576 1253 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 ZNF654Q8IZM8 581 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 DBF4BQ8NFT6 615 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 ATP6V0A1Q93050 837 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 GPR20Q99678 358 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 SPZ1Q9BXG8 430 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 SUGCTQ9HAC7 445 aa19.3■□□□□ 0.68
TRIM13-208ENST00000478111 LINC01553A4QN01 128 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 SMARCA1P28370 1054 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
TRIM13-208ENST00000478111 NEDD9Q14511 834 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 AAK1Q2M2I8 961 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 PLEKHG4Q58EX7 1191 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 GDPD5Q8WTR4 605 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 USP26Q9BXU7 913 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 LMCD1Q9NZU5 365 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 COG5Q9UP83 839 aa19.29■□□□□ 0.68
TRIM13-208ENST00000478111 EMSYQ7Z589 1322 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 PIK3CDO00329 1044 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 FIBPO43427 364 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 DDAH1O94760 285 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 ADAM17P78536 824 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 PCNX4Q63HM2 1172 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 FAM117BQ6P1L5 589 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 TGS1Q96RS0 853 aaKnown RBP19.28■□□□□ 0.68
TRIM13-208ENST00000478111 MTA3Q9BTC8 594 aa19.28■□□□□ 0.68
TRIM13-208ENST00000478111 NOP56O00567 594 aaKnown RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 PLEKHA8P1O95397 391 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 HTRA4P83105 476 aaPredicted RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 TRIM50Q86XT4 487 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 SRBD1Q8N5C6 995 aaKnown RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 HLA-CQ95604 372 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 SENP7Q9BQF6 1050 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 LSG1Q9H089 658 aaKnown RBP19.27■□□□□ 0.68
TRIM13-208ENST00000478111 SETD4Q9NVD3 440 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 MTUS1Q9ULD2 1270 aa19.27■□□□□ 0.68
TRIM13-208ENST00000478111 SH2B2O14492 632 aaPredicted RBP19.26■□□□□ 0.67
TRIM13-208ENST00000478111 PRC1O43663 620 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 COL9A1P20849 921 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 XRRA1Q6P2D8 792 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
TRIM13-208ENST00000478111 SMARCC2Q8TAQ2 1214 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 SP7Q8TDD2 431 aaPredicted RBP19.26■□□□□ 0.67
TRIM13-208ENST00000478111 LZTS2Q9BRK4 669 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 INSL6Q9Y581 213 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 NLRC5Q86WI3 1866 aa19.26■□□□□ 0.67
TRIM13-208ENST00000478111 MYO7AQ13402 2215 aa19.25■□□□□ 0.67
TRIM13-208ENST00000478111 ATP9AO75110 1047 aa19.25■□□□□ 0.67
TRIM13-208ENST00000478111 KIF5BP33176 963 aa19.25■□□□□ 0.67
TRIM13-208ENST00000478111 SLC27A2O14975 620 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 CAND2O75155 1236 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 AMHP03971 560 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 CTSHP09668 335 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 RXRAP19793 462 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 MCM5P33992 734 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 LIFRP42702 1097 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 UTP14CQ5TAP6 766 aaKnown RBP19.24■□□□□ 0.67
TRIM13-208ENST00000478111 CASC1Q6TDU7 716 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 MYOCDQ8IZQ8 938 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 CUL5Q93034 780 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 TMEM87BQ96K49 555 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 C17orf80Q9BSJ5 609 aa19.24■□□□□ 0.67
TRIM13-208ENST00000478111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.23■□□□□ 0.67
TRIM13-208ENST00000478111 KCNA2P16389 499 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 GNAQP50148 359 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 NECTIN1Q15223 517 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 FAM26DQ5JW98 314 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 TMTC2Q8N394 836 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 TOP1MTQ969P6 601 aa19.23■□□□□ 0.67
TRIM13-208ENST00000478111 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
TRIM13-208ENST00000478111 RAPGEFL1Q9UHV5 662 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms