RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 DIAPH1O60610 1272 aaKnown RBP7.09□□□□□ -1.27
VPS50-213ENST00000477572 GNAT1P11488 350 aa7.09□□□□□ -1.27
VPS50-213ENST00000477572 MLLT6P55198 1093 aaPredicted RBP7.09□□□□□ -1.27
VPS50-213ENST00000477572 RSPO2Q6UXX9 243 aaPredicted RBP7.09□□□□□ -1.27
VPS50-213ENST00000477572 OTOP3Q7RTS5 596 aa7.09□□□□□ -1.27
VPS50-213ENST00000477572 MAFKO60675 156 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 SOD2P04179 222 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 IL13P35225 146 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 GPR85P60893 370 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 SSRP1Q08945 709 aaKnown RBP7.08□□□□□ -1.28
VPS50-213ENST00000477572 TUSC3Q13454 348 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 FAM209AQ5JX71 171 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 FOXB2Q5VYV0 432 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 STYK1Q6J9G0 422 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 IFNL3Q8IZI9 196 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 PHOSPHO1Q8TCT1 267 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 CDC6Q99741 560 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 IPPKQ9H8X2 491 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 MSRB2Q9Y3D2 182 aa7.08□□□□□ -1.28
VPS50-213ENST00000477572 MROH6A6NGR9 719 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 ADCY3O60266 1144 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 CYP1A1P04798 512 aaPredicted RBP7.07□□□□□ -1.28
VPS50-213ENST00000477572 ZNF28P17035 718 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 L2HGDHQ9H9P8 463 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 INVSQ9Y283 1065 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 TELO2Q9Y4R8 837 aa7.07□□□□□ -1.28
VPS50-213ENST00000477572 K7ESM1 405 aa7.06□□□□□ -1.28
VPS50-213ENST00000477572 SPIRE1Q08AE8 756 aa7.06□□□□□ -1.28
VPS50-213ENST00000477572 FAM26FQ5R3K3 315 aa7.06□□□□□ -1.28
VPS50-213ENST00000477572 TRIM48Q8IWZ4 208 aa7.06□□□□□ -1.28
VPS50-213ENST00000477572 CD244Q9BZW8 370 aa7.06□□□□□ -1.28
VPS50-213ENST00000477572 FAM153BP0C7A2 387 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 RASGRF1Q13972 1273 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
VPS50-213ENST00000477572 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 PROSER1Q86XN7 944 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS50-213ENST00000477572 ZCCHC14Q8WYQ9 949 aaKnown RBP7.05□□□□□ -1.28
VPS50-213ENST00000477572 LCORQ96JN0 433 aaPredicted RBP7.05□□□□□ -1.28
VPS50-213ENST00000477572 TMEM209Q96SK2 561 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 ALG1Q9BT22 464 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 KRTAP4-2Q9BYR5 136 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 DSEQ9UL01 958 aa7.05□□□□□ -1.28
VPS50-213ENST00000477572 ZNF536O15090 1300 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 TRBV23-1A0A0A0MS06 115 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 CKMP06732 381 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 GLRBP48167 497 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 NFKB2Q00653 900 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 TBC1D10BQ4KMP7 808 aaPredicted RBP7.04□□□□□ -1.28
VPS50-213ENST00000477572 PAN2Q504Q3 1202 aaKnown RBP7.04□□□□□ -1.28
VPS50-213ENST00000477572 VASNQ6EMK4 673 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 CYP4F22Q6NT55 531 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 SCUBE1Q8IWY4 988 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 LGI4Q8N135 537 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 ZBTB38Q8NAP3 1195 aaPredicted RBP7.04□□□□□ -1.28
VPS50-213ENST00000477572 UHMK1Q8TAS1 419 aaKnown RBP7.04□□□□□ -1.28
VPS50-213ENST00000477572 CCDC113Q9H0I3 377 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 TMEM168Q9H0V1 697 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 PCDHA8Q9Y5H6 950 aa7.04□□□□□ -1.28
VPS50-213ENST00000477572 FAM221BA6H8Z2 402 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 ITGB3P05106 788 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.03□□□□□ -1.28
VPS50-213ENST00000477572 MTDHQ86UE4 582 aaKnown RBP7.03□□□□□ -1.28
VPS50-213ENST00000477572 ZNF669Q96BR6 464 aaPredicted RBP7.03□□□□□ -1.28
VPS50-213ENST00000477572 EXOC2Q96KP1 924 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
VPS50-213ENST00000477572 IPO9Q96P70 1041 aaKnown RBP7.03□□□□□ -1.28
VPS50-213ENST00000477572 KRTAP4-11Q9BYQ6 195 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 ZDHHC9Q9Y397 364 aa7.03□□□□□ -1.28
VPS50-213ENST00000477572 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.28
VPS50-213ENST00000477572 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 B4GALT3O60512 393 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 ADRB1P08588 477 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 SRGAP2CP0DJJ0 459 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 FAHP16930 419 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 EFEMP1Q12805 493 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 SKIDA1Q1XH10 827 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 HABP4Q5JVS0 413 aaKnown RBP7.02□□□□□ -1.29
VPS50-213ENST00000477572 HHIPL2Q6UWX4 724 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 LIMS2Q7Z4I7 341 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 TTLL11Q8NHH1 800 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
VPS50-213ENST00000477572 PLATP00750 562 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 C6orf222P0C671 652 aaPredicted RBP7.01□□□□□ -1.29
VPS50-213ENST00000477572 KRT15P19012 456 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 GUCY1A3Q02108 690 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 PAK1Q13153 545 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 SPATS1Q496A3 300 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 KCTD1Q719H9 257 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 GGNQ86UU5 652 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms