RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 GTF2F1P35269 517 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS45-207ENST00000477558 HLFQ16534 295 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 TDRD10Q5VZ19 366 aaKnown RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 ZNF34Q8IZ26 560 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 C19orf47Q8N9M1 422 aaKnown RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 DTWD2Q8NBA8 298 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 CHMP4AQ9BY43 222 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 PCMTD2Q9NV79 361 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 HYPKQ9NX55 129 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 SUCOQ9UBS9 1254 aaKnown RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 PRKAG3Q9UGI9 489 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 ST14Q9Y5Y6 855 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 ABCC12Q96J65 1359 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 SNED1Q8TER0 1413 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 LRRC37AA6NMS7 1700 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 KLRG2A4D1S0 409 aaPredicted RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 MYL6BP14649 208 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 EIF2S2P20042 333 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 KCNA3P22001 575 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 KIR3DL1P43629 444 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 PMS1P54277 932 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 EXOSC9Q06265 439 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 SNW1Q13573 536 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 CCDC30Q5VVM6 783 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 PRR5LQ6MZQ0 368 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 COPS6Q7L5N1 327 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 PLBD2Q8NHP8 589 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 HNRNPLLQ8WVV9 542 aaKnown RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 COX4I2Q96KJ9 171 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 DHRS1Q96LJ7 313 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 ASPNQ9BXN1 380 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 PPP1R1BQ9UD71 204 aaPredicted RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 ZNF214Q9UL59 606 aaPredicted RBP6.66□□□□□ -1.34
VPS45-207ENST00000477558 ZNF652Q9Y2D9 606 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 MYH3P11055 1940 aa6.66□□□□□ -1.34
VPS45-207ENST00000477558 CACNA1SQ13698 1873 aa6.65□□□□□ -1.34
VPS45-207ENST00000477558 FER1L6Q2WGJ9 1857 aa6.65□□□□□ -1.34
VPS45-207ENST00000477558 NTSR2O95665 410 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 SERPINB2P05120 415 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 CT47B1P0C2W7 299 aaPredicted RBP6.65□□□□□ -1.35
VPS45-207ENST00000477558 SPINK2P20155 84 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 CD96P40200 585 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 TGFB2P61812 414 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 NBPF9Q3BBW0 867 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 AXDND1Q5T1B0 1012 aaPredicted RBP6.65□□□□□ -1.35
VPS45-207ENST00000477558 KIF6Q6ZMV9 814 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 ISCA1Q9BUE6 129 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 DUSP15Q9H1R2 295 aaPredicted RBP6.65□□□□□ -1.35
VPS45-207ENST00000477558 BSDC1Q9NW68 430 aaPredicted RBP6.65□□□□□ -1.35
VPS45-207ENST00000477558 LTBP1Q14766 1721 aa6.65□□□□□ -1.35
VPS45-207ENST00000477558 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 KIAA1324LA8MWY0 1029 aaPredicted RBP6.64□□□□□ -1.35
VPS45-207ENST00000477558 H3BS24 57 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 ELL2O00472 640 aaPredicted RBP6.64□□□□□ -1.35
VPS45-207ENST00000477558 RNF4P78317 190 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 TCIRG1Q13488 830 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 AOC3Q16853 763 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 GNPTABQ3T906 1256 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 CRY2Q49AN0 593 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 PARP10Q53GL7 1025 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 HSP90AB3PQ58FF7 597 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 DCAF15Q66K64 600 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 SPRED2Q7Z698 418 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 MICAL1Q8TDZ2 1067 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 SREK1Q8WXA9 508 aaKnown RBP6.64□□□□□ -1.35
VPS45-207ENST00000477558 UBE2FQ969M7 185 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 MKRN2Q9H000 416 aaKnown RBP6.64□□□□□ -1.35
VPS45-207ENST00000477558 PHAXQ9H814 394 aaKnown RBP6.64□□□□□ -1.35
VPS45-207ENST00000477558 SEMA3GQ9NS98 782 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 ACTR10Q9NZ32 417 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 ZSWIM5Q9P217 1185 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 CCDC39Q9UFE4 941 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 KCNH3Q9ULD8 1083 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 SNX11Q9Y5W9 270 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 SLX4Q8IY92 1834 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 SBF1O95248 1867 aa6.64□□□□□ -1.35
VPS45-207ENST00000477558 COL4A1P02462 1669 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 SHISA3A0PJX4 238 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 PAX4O43316 350 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 KLF4O43474 513 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
VPS45-207ENST00000477558 AUHQ13825 339 aaKnown RBP6.63□□□□□ -1.35
VPS45-207ENST00000477558 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
VPS45-207ENST00000477558 NFXL1Q6ZNB6 911 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 G2E3Q7L622 706 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 NLRP10Q86W26 655 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 CCDC144CPQ8IYA2 1237 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 CNBD1Q8NA66 436 aa6.63□□□□□ -1.35
VPS45-207ENST00000477558 PIWIL2Q8TC59 973 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms