RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FHDC1Q9C0D6 1143 aaPredicted RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MKNK2Q9HBH9 465 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 EPB41L5Q9HCM4 733 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 BLOC1S4Q9NUP1 217 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 AIPL1Q9NZN9 384 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 COL4A1P02462 1669 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYMKA6NI61 221 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 BHMG1C9JSJ3 638 aaPredicted RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 ANKRD65E5RJM6 399 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCDC188H7C350 402 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 EPHB6O15197 1021 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 GLI1P08151 1106 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 PPP4CP60510 307 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 GUCY2DQ02846 1103 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZCWPW2Q504Y3 356 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 AGBL2Q5U5Z8 902 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCDC50Q8IVM0 306 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYOCDQ8IZQ8 938 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 REXO1Q8N1G1 1221 aaKnown RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 USP38Q8NB14 1042 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZNF473Q8WTR7 871 aaKnown RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 PLIN2Q99541 437 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 NAP1L4Q99733 375 aaKnown RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TMBIM4Q9HC24 238 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 NFU1Q9UMS0 254 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYH14Q7Z406 1995 aaKnown RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 KLRF2D3W0D1 207 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 H0YHG0 523 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZBTB7AO95365 584 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 BAG3O95817 575 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 CYP2D6P10635 497 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 CARSP49589 748 aaKnown RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 MNAT1P51948 309 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 SMTNP53814 917 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 GFPT1Q06210 699 aaPredicted RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 ITGB3BPQ13352 177 aaPredicted RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 CALCRLQ16602 461 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 FAM83BQ5T0W9 1011 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 KRT79Q5XKE5 535 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 NLRP14Q86W24 1093 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZC3H3Q8IXZ2 948 aaKnown RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 ACTRT1Q8TDG2 376 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 PIK3R5Q8WYR1 880 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 RNPC3Q96LT9 517 aaKnown RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 VCPKMTQ9H867 229 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 CAPN7Q9Y6W3 813 aa14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 DDX60LQ5H9U9 1706 aaKnown RBP14.88□□□□□ -0.03
HLA-DMA-208ENST00000477541 KDM3AQ9Y4C1 1321 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 GOLGA6L7A0A1B0GV03 622 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 PALMO75781 387 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 PAEPP09466 180 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 TECP42680 631 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 CDR1P51861 262 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 KCNMA1Q12791 1236 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 SLC35G1Q2M3R5 365 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 DZIP1Q86YF9 867 aaKnown RBP14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 WDR66Q8TBY9 1149 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYCBPAPQ8TBZ2 947 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 CASKIN2Q8WXE0 1202 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 PNMA5Q96PV4 448 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 TMEM47Q9BQJ4 181 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 SALL4Q9UJQ4 1053 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 COL24A1Q17RW2 1714 aa14.87□□□□□ -0.03
HLA-DMA-208ENST00000477541 TMCO5BA8MYB1 307 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 GCOM1H8Y6P7 765 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 NCK2O43639 380 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 KRT14P02533 472 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 LDHCP07864 332 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYZAPP0CAP1 466 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 CXCR5P32302 372 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 ACTN3Q08043 901 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCDC40Q4G0X9 1142 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 KCNV1Q6PIU1 500 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 TBCKQ8TEA7 893 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 LMBR1Q8WVP7 490 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCT8L2Q96SF2 557 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 NT5C3AQ9H0P0 336 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 EHD4Q9H223 541 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 THRAP3Q9Y2W1 955 aaKnown RBP14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYH7BA7E2Y1 1941 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 NHSQ6T4R5 1651 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 CHUKO15111 745 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 ATP6V1AP38606 617 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 NOVP48745 357 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 USP11P51784 963 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 RPS6KA1Q15418 735 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 PPP2R5EQ16537 467 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 HYIQ5T013 277 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 C6orf89Q6UWU4 347 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 TRIM59Q8IWR1 403 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms