RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SP2Q02086 613 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 LY6KQ17RY6 165 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 Q4G0T1 1027 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 RILPL1Q5EBL4 403 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 MYSM1Q5VVJ2 828 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 KCNV1Q6PIU1 500 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 CDHR1Q96JP9 859 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 PDLIM2Q96JY6 352 aa19.06■□□□□ 0.64
EPHB4-204ENST00000477446 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.06■□□□□ 0.642e-7■■■□□ 15.2
EPHB4-204ENST00000477446 DDX41Q9UJV9 622 aaKnown RBP19.06■□□□□ 0.64
EPHB4-204ENST00000477446 DOCK5Q9H7D0 1870 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 ATP9AO75110 1047 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 CCDC192P0DO97 292 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 PTGS1P23219 599 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
EPHB4-204ENST00000477446 DUSP28Q4G0W2 176 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 TTC38Q5R3I4 469 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 GJC2Q5T442 439 aaPredicted RBP19.05■□□□□ 0.64
EPHB4-204ENST00000477446 ANO1Q5XXA6 986 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 LENG1Q96BZ8 264 aaPredicted RBP19.05■□□□□ 0.64
EPHB4-204ENST00000477446 FUCA2Q9BTY2 467 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 RNF208Q9H0X6 261 aa19.05■□□□□ 0.64
EPHB4-204ENST00000477446 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
EPHB4-204ENST00000477446 CTAGE5O15320 804 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 MCM7P33993 719 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 ZNF174Q15697 407 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 COPS5Q92905 334 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 AGO4Q9HCK5 861 aaKnown RBP19.04■□□□□ 0.64
EPHB4-204ENST00000477446 PAK6Q9NQU5 681 aaPredicted RBP19.04■□□□□ 0.64
EPHB4-204ENST00000477446 PKD2L1Q9P0L9 805 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 GNEQ9Y223 722 aaKnown RBP19.04■□□□□ 0.64
EPHB4-204ENST00000477446 PCDHB6Q9Y5E3 794 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
EPHB4-204ENST00000477446 MSH4O15457 936 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 YEATS4O95619 227 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 KCNA2P16389 499 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 UBA1P22314 1058 aaKnown RBP19.03■□□□□ 0.64
EPHB4-204ENST00000477446 SENP7Q9BQF6 1050 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 BCAS3Q9H6U6 928 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 FRMPD3Q5JV73 1810 aa19.03■□□□□ 0.64
EPHB4-204ENST00000477446 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
EPHB4-204ENST00000477446 DUSP11O75319 330 aaKnown RBP19.02■□□□□ 0.64
EPHB4-204ENST00000477446 LIG1P18858 919 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 LHX8Q68G74 356 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 RBM43Q6ZSC3 357 aaKnown RBP19.02■□□□□ 0.64
EPHB4-204ENST00000477446 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 KCNG4Q8TDN1 519 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 USP28Q96RU2 1077 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 ZNF577Q9BSK1 485 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 TNMDQ9H2S6 317 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 CLSTN2Q9H4D0 955 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 DACT1Q9NYF0 836 aa19.02■□□□□ 0.64
EPHB4-204ENST00000477446 POTEFA5A3E0 1075 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 IPO5O00410 1097 aaKnown RBP19.02■□□□□ 0.63
EPHB4-204ENST00000477446 NEMFO60524 1076 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 MSCO60682 206 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 CAVIN2O95810 425 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 RARBP10826 455 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 ITGB3BPQ13352 177 aaPredicted RBP19.02■□□□□ 0.63
EPHB4-204ENST00000477446 NEDD9Q14511 834 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 ETNPPLQ8TBG4 499 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 GJA10Q969M2 543 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 KCNMB3Q9NPA1 279 aa19.02■□□□□ 0.63
EPHB4-204ENST00000477446 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.02■□□□□ 0.63
EPHB4-204ENST00000477446 A0A1W2PQ27 194 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 A0A1W2PQ64 194 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 A0A1W2PQD8 194 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 DYNC1LI2O43237 492 aaPredicted RBP19.01■□□□□ 0.63
EPHB4-204ENST00000477446 SORBS3O60504 671 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 GGPS1O95749 300 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 GH1P01241 217 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 ORC2Q13416 577 aaPredicted RBP19.01■□□□□ 0.63
EPHB4-204ENST00000477446 CELF3Q5SZQ8 465 aaKnown RBP19.01■□□□□ 0.63
EPHB4-204ENST00000477446 ADALQ6DHV7 355 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 TLK2Q86UE8 772 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 DHX37Q8IY37 1157 aaKnown RBP19.01■□□□□ 0.63
EPHB4-204ENST00000477446 GIMAP8Q8ND71 665 aaPredicted RBP19.01■□□□□ 0.63
EPHB4-204ENST00000477446 HAS1Q92839 578 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 DEFB118Q96PH6 123 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 Q9Y3F1 56 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 BRCA2P51587 3418 aa19.01■□□□□ 0.63
EPHB4-204ENST00000477446 DHX15O43143 795 aaKnown RBP19■□□□□ 0.63
EPHB4-204ENST00000477446 ARHGAP1Q07960 439 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 CCDC73Q6ZRK6 1079 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 C4orf32Q8N8J7 132 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 RNF214Q8ND24 703 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 SLC5A5Q92911 643 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 MLXIPQ9HAP2 919 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 XPNPEP3Q9NQH7 507 aa19■□□□□ 0.63
EPHB4-204ENST00000477446 TBX3O15119 743 aa18.99■□□□□ 0.63
EPHB4-204ENST00000477446 NFASCO94856 1347 aa18.99■□□□□ 0.63
EPHB4-204ENST00000477446 FARP2O94887 1054 aaPredicted RBP18.99■□□□□ 0.63
EPHB4-204ENST00000477446 PGK1P00558 417 aa18.99■□□□□ 0.63
EPHB4-204ENST00000477446 IRX5P78411 483 aaPredicted RBP18.99■□□□□ 0.63
EPHB4-204ENST00000477446 CALCRLQ16602 461 aa18.99■□□□□ 0.63
EPHB4-204ENST00000477446 TPRNQ4KMQ1 711 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms