RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 HOXD8P13378 290 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-204ENST00000477429 CASTP20810 708 aaKnown RBP11.45□□□□□ -0.58
COL4A5-204ENST00000477429 DGKDQ16760 1214 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 PLEKHG4Q58EX7 1191 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 SERINC5Q86VE9 423 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-204ENST00000477429 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 C16orf70Q9BSU1 422 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-204ENST00000477429 MICAL3Q7RTP6 2002 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 KIAA1217Q5T5P2 1943 aa11.45□□□□□ -0.58
COL4A5-204ENST00000477429 GCN1Q92616 2671 aaKnown RBP11.44□□□□□ -0.58
COL4A5-204ENST00000477429 H3BNC9 293 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 LINC01565O15544 149 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 TREHO43280 583 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 UPP2O95045 317 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 CSPG5O95196 566 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 NR3C2P08235 984 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 HSPD1P10809 573 aaKnown RBP11.44□□□□□ -0.58
COL4A5-204ENST00000477429 MX1P20591 662 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 HOXC8P31273 242 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 THPOP40225 353 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 GPM6BQ13491 265 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 QRICH1Q2TAL8 776 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 EP400NLQ6ZTU2 488 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 PPTC7Q8NI37 304 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 NSUN6Q8TEA1 469 aaKnown RBP11.44□□□□□ -0.58
COL4A5-204ENST00000477429 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
COL4A5-204ENST00000477429 JMJD4Q9H9V9 463 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 MUTYHQ9UIF7 546 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 INSL6Q9Y581 213 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 KMT2EQ8IZD2 1858 aa11.44□□□□□ -0.58
COL4A5-204ENST00000477429 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 GRM6O15303 877 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 CTSHP09668 335 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 HYAL1Q12794 435 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-204ENST00000477429 STXBP2Q15833 593 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 TMEM192Q8IY95 271 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 MFSD14AQ96MC6 490 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 CRBNQ96SW2 442 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 PXMP2Q9NR77 195 aa11.43□□□□□ -0.58
COL4A5-204ENST00000477429 TBX10O75333 385 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 AMHP03971 560 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 UBA1P22314 1058 aaKnown RBP11.42□□□□□ -0.58
COL4A5-204ENST00000477429 CAMK1Q14012 370 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 ST3GAL2Q16842 350 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 CTC1Q2NKJ3 1217 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 DHX37Q8IY37 1157 aaKnown RBP11.42□□□□□ -0.58
COL4A5-204ENST00000477429 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 SPATA33Q96N06 139 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 TTC14Q96N46 770 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 HELLSQ9NRZ9 838 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 MRVI1Q9Y6F6 885 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 NAV2Q8IVL1 2488 aa11.42□□□□□ -0.58
COL4A5-204ENST00000477429 ABCB11O95342 1321 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 MYH7BA7E2Y1 1941 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 EIF3JO75822 258 aaKnown RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 PARNO95453 639 aaKnown RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 GGPS1O95749 300 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 CFBP00751 764 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 SMIM10L2AP0DMW4 78 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 SMIM10L2BP0DMW5 78 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 DNAJB1P25685 340 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 HOXA13P31271 388 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 HSD17B4P51659 736 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 TRIM50Q86XT4 487 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 ADHFE1Q8IWW8 467 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 PDCD2LQ9BRP1 358 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
COL4A5-204ENST00000477429 RNPEPQ9H4A4 650 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
COL4A5-204ENST00000477429 PRR23AA6NEV1 266 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 MBTPS2O43462 519 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 EFCAB14O75071 495 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 KDM4AO75164 1064 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 PPFIA4O75335 1185 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 MYCLP12524 364 aaPredicted RBP11.4□□□□□ -0.58
COL4A5-204ENST00000477429 PGM5Q15124 567 aa11.4□□□□□ -0.58
COL4A5-204ENST00000477429 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms