RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CPVLQ9H3G5 476 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 LINC01553A4QN01 128 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 CPLX1O14810 134 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 GJB5O95377 273 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 SLC16A2P36021 539 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 GNAQP50148 359 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 PURAQ00577 322 aaKnown RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 CUL4AQ13619 759 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 TAPT1Q6NXT6 567 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 NFRKBQ6P4R8 1299 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 CCDC82Q8N4S0 544 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 SRBD1Q8N5C6 995 aaKnown RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 MTG1Q9BT17 334 aaPredicted RBP13.3□□□□□ -0.28
LSM2-212ENST00000477182 UBA5Q9GZZ9 404 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
LSM2-212ENST00000477182 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 SCN10AQ9Y5Y9 1956 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 JAK2O60674 1132 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 EFCAB14O75071 495 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 IRS1P35568 1242 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 IKQ13123 557 aaPredicted RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 NTRK3Q16288 839 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
LSM2-212ENST00000477182 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 LZTS2Q9BRK4 669 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 PDGFCQ9NRA1 345 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 HOMER2Q9NSB8 354 aa13.29□□□□□ -0.28
LSM2-212ENST00000477182 SPTBN4Q9H254 2564 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 ABHD14A-ACY1A0A1B0GW23 586 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 NCK2O43639 380 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 CYTH3O43739 400 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 KPNA6O60684 536 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 HSP90AA1P07900 732 aaKnown RBP13.28□□□□□ -0.28
LSM2-212ENST00000477182 MYL3P08590 195 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 IFNAR1P17181 557 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 FUT2Q10981 343 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 NBPF20Q3BBV1 942 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 TKFCQ3LXA3 575 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 SYDE2Q5VT97 1194 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 CNKSR3Q6P9H4 555 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
LSM2-212ENST00000477182 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 EDAQ92838 391 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 PHKBQ93100 1093 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 SPZ1Q9BXG8 430 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
LSM2-212ENST00000477182 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 TECTAO75443 2155 aa13.28□□□□□ -0.28
LSM2-212ENST00000477182 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 CDKL5O76039 1030 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 PTGS1P23219 599 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 STAT2P52630 851 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 DEFB103AP81534 67 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
LSM2-212ENST00000477182 TCF15Q12870 199 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 IER5LQ5T953 404 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 EP400NLQ6ZTU2 488 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 EEPD1Q7L9B9 569 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.29
LSM2-212ENST00000477182 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 ADGRF4Q8IZF3 695 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 CHURC1Q8WUH1 139 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 PBXIP1Q96AQ6 731 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 SAMD11Q96NU1 681 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.29
LSM2-212ENST00000477182 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
LSM2-212ENST00000477182 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.29
LSM2-212ENST00000477182 PLA2G6O60733 806 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 SMARCA1P28370 1054 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 SNAP25P60880 206 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms