RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 OFD1O75665 1012 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 AKAP5P24588 427 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 HOXC12P31275 282 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 KCNJ6P48051 423 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 KPNA1P52294 538 aaPredicted RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 GFRA1P56159 465 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 DDX10Q13206 875 aaKnown RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 TTLL5Q6EMB2 1281 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 C16orf71Q8IYS4 520 aaPredicted RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 CYP4X1Q8N118 509 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 SPATA5Q8NB90 893 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 SLC35G2Q8TBE7 412 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 TRIM63Q969Q1 353 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 TBATAQ96M53 351 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 NAA15Q9BXJ9 866 aaKnown RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 RNF38Q9H0F5 515 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 TRMT13Q9NUP7 481 aaKnown RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 PKD2L1Q9P0L9 805 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 PARP4Q9UKK3 1724 aaKnown RBP8.23□□□□□ -1.09
LRCH3-215ENST00000476664 A0A0C4DFX4 3053 aa8.23□□□□□ -1.09
LRCH3-215ENST00000476664 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 HFM1A2PYH4 1435 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 DYTNA2CJ06 578 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 DCDC2CA8MYV0 355 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 SOX1O00570 391 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 XPOTO43592 962 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 GLRX3O76003 335 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 UBOX5O94941 541 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 CPP00450 1065 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 NEFMP07197 916 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 ITGA4P13612 1032 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 ARL4DP49703 201 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 USP14P54578 494 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 GUCY1A3Q02108 690 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 BTKQ06187 659 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 POU4F3Q15319 338 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 NTRK3Q16288 839 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 RRP12Q5JTH9 1297 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 SLC6A19Q695T7 634 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 STYK1Q6J9G0 422 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 CLASRPQ8N2M8 674 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 LACRTQ9GZZ8 138 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 CCDC86Q9H6F5 360 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 VTA1Q9NP79 307 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 CYP26B1Q9NR63 512 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 C14orf119Q9NWQ9 140 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 DNAJB12Q9NXW2 375 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 TPX2Q9ULW0 747 aaKnown RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 INVSQ9Y283 1065 aa8.22□□□□□ -1.09
LRCH3-215ENST00000476664 RGPD8O14715 1765 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-215ENST00000476664 PAPPAQ13219 1627 aa8.21□□□□□ -1.09
LRCH3-215ENST00000476664 KLHL33A6NCF5 533 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 TRIM75PA6NK02 468 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 EPB41L2O43491 1005 aaKnown RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 ZBED1O96006 694 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 CD247P20963 164 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 ECE1P42892 770 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 GTF2A2P52657 109 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 TBX2Q13207 712 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 ODF1Q14990 250 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 B3GNT9Q6UX72 402 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 SAPCD2Q86UD0 394 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 ARHGEF39Q8N4T4 335 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 CCT6BQ92526 530 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 PGBD4Q96DM1 585 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 CDK5RAP3Q96JB5 506 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 TAAR9Q96RI9 348 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 MKRN2Q9H000 416 aaKnown RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 SLC12A5Q9H2X9 1139 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 PICK1Q9NRD5 415 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 THG1LQ9NWX6 298 aaKnown RBP8.21□□□□□ -1.1
LRCH3-215ENST00000476664 ZNF451Q9Y4E5 1061 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHA9Q9Y5H5 950 aa8.21□□□□□ -1.1
LRCH3-215ENST00000476664 NAIPQ13075 1403 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 hCG_1642624A0A1W2PR95 340 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 TPP1O14773 563 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 AP1G1O43747 822 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 KCNH1O95259 989 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 MYBPC2Q14324 1141 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 PDE3AQ14432 1141 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 KIF4BQ2VIQ3 1234 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 HP1BP3Q5SSJ5 553 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-215ENST00000476664 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 GTF2IRD2BQ6EKJ0 949 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 MZT2AQ6P582 158 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 USP53Q70EK8 1073 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 GTF2IRD2Q86UP8 949 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms