RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CAND2O75155 1236 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 CTNNB1P35222 781 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 GHRHRQ02643 423 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 HYAL1Q12794 435 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 NMIQ13287 307 aaPredicted RBP19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 VSIG10LQ86VR7 867 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 FIBCD1Q8N539 461 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 IL31RAQ8NI17 732 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 IL17RAQ96F46 866 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 SNX27Q96L92 541 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 RNPEPQ9H4A4 650 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 TUT1Q9H6E5 874 aaKnown RBP19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
APOBEC3F-203ENST00000476513 C5orf67F2Z3F1 127 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 GRM6O15303 877 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 MBTPS2O43462 519 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 TGFB3P10600 412 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 PGM5Q15124 567 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 CCDC178Q5BJE1 867 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 IQCA1Q86XH1 822 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 RNF135Q8IUD6 432 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 GPKOWQ92917 476 aaPredicted RBP eCLIP19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 PHOX2BQ99453 314 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 POP1Q99575 1024 aaKnown RBP19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 MLXIPQ9HAP2 919 aa19.15■□□□□ 0.66
APOBEC3F-203ENST00000476513 KDM4AO75164 1064 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 LGALS2P05162 132 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 RB1P06400 928 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 PARP1P09874 1014 aaKnown RBP19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 LINC00271P0C7V0 271 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 BMPR1AP36894 532 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 PDE1AP54750 535 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 APBB2Q92870 758 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 ZFP91Q96JP5 570 aaPredicted RBP19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 C11orf84Q9BUA3 381 aaPredicted RBP19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 AMNQ9BXJ7 453 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 LMAN2LQ9H0V9 348 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 BCAS3Q9H6U6 928 aa19.14■□□□□ 0.65
APOBEC3F-203ENST00000476513 PPP1R11O60927 126 aaPredicted RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 TBX10O75333 385 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 HOXA13P31271 388 aaPredicted RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 SMAD4Q13485 552 aaKnown RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 TICAM2Q86XR7 235 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 ENAHQ8N8S7 591 aaPredicted RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 EDAQ92838 391 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 ZSCAN10Q96SZ4 725 aaPredicted RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 SETD4Q9NVD3 440 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 MAP3K20Q9NYL2 800 aaKnown RBP19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 MYH7BA7E2Y1 1941 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 TECTAO75443 2155 aa19.13■□□□□ 0.65
APOBEC3F-203ENST00000476513 ZNF213O14771 459 aa19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 CCND2P30279 289 aa19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 FAM26DQ5JW98 314 aa19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 STAG2Q8N3U4 1231 aa19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 PRSS33Q8NF86 280 aa19.12■□□□□ 0.65
APOBEC3F-203ENST00000476513 STXBP3O00186 592 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 LINC01565O15544 149 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 GNAT1P11488 350 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 NT5C2P49902 561 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 BMP8AQ7Z5Y6 402 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 CLP1Q92989 425 aaKnown RBP19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 USP26Q9BXU7 913 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 IGFLR1Q9H665 355 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 CD207Q9UJ71 328 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 RWDD3Q9Y3V2 267 aa19.11■□□□□ 0.65
APOBEC3F-203ENST00000476513 RALGAPA2Q2PPJ7 1873 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 NLRC5Q86WI3 1866 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 ADGRA3Q8IWK6 1321 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 B4E1Z4 1266 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 ADAM17P78536 824 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 IER5LQ5T953 404 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 SAMD3Q8N6K7 520 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 MTMR8Q96EF0 704 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 RC3H2Q9HBD1 1191 aaKnown RBP19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 ZSWIM5Q9P217 1185 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 PCDHA1Q9Y5I3 950 aa19.1■□□□□ 0.65
APOBEC3F-203ENST00000476513 NOP56O00567 594 aaKnown RBP19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 CSPG5O95196 566 aa19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 CHRNA1P02708 482 aa19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 MMP1P03956 469 aa19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 ADAM15Q13444 863 aa19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 TRIM50Q86XT4 487 aa19.09■□□□□ 0.65
APOBEC3F-203ENST00000476513 ATG2AQ2TAZ0 1938 aa19.08■□□□□ 0.65
APOBEC3F-203ENST00000476513 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 KLRF2D3W0D1 207 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 GCOM1H8Y6P7 765 aaPredicted RBP19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 M0R296 226 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 ZBTB5O15062 677 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 POLR2MP0CAP2 368 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 GHRP10912 638 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 PTPN5P54829 565 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 MFAP1P55081 439 aaKnown RBP19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 ARHGAP4P98171 946 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 CAMK1Q14012 370 aa19.08■□□□□ 0.64
APOBEC3F-203ENST00000476513 METTL7BQ6UX53 244 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms