RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SCLYQ96I15 445 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 ZMYND12Q9H0C1 365 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 GLT8D2Q9H1C3 349 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 EHMT1Q9H9B1 1298 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 IL23AQ9NPF7 189 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 JADE2Q9NQC1 790 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 GTF2IRD1Q9UHL9 959 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 NOP56O00567 594 aaKnown RBP24.21■■□□□ 1.47
LIME1-204ENST00000476183 AKAP17AQ02040 695 aaKnown RBP24.21■■□□□ 1.47
LIME1-204ENST00000476183 STK3Q13188 491 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 AP3B2Q13367 1082 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 MTMR1Q13613 665 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 HIC1Q14526 733 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 JAKMIP3Q5VZ66 844 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 ZNF365Q70YC5 407 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 Q7L0L9 218 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 C7orf31Q8N865 590 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 IL17RAQ96F46 866 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 CDHR1Q96JP9 859 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 PKD2L1Q9P0L9 805 aa24.21■■□□□ 1.47
LIME1-204ENST00000476183 TRIP12Q14669 1992 aaPredicted RBP24.21■■□□□ 1.47
LIME1-204ENST00000476183 SCN5AQ14524 2016 aa24.2■■□□□ 1.47
LIME1-204ENST00000476183 SREBF1P36956 1147 aa24.2■■□□□ 1.46
LIME1-204ENST00000476183 SP4Q02446 784 aa24.2■■□□□ 1.46
LIME1-204ENST00000476183 DHX38Q92620 1227 aaKnown RBP24.2■■□□□ 1.46
LIME1-204ENST00000476183 MXRA8Q9BRK3 442 aa24.2■■□□□ 1.46
LIME1-204ENST00000476183 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
LIME1-204ENST00000476183 ZNF200P98182 395 aaPredicted RBP24.19■■□□□ 1.46
LIME1-204ENST00000476183 RASIP1Q5U651 963 aa24.19■■□□□ 1.46
LIME1-204ENST00000476183 PSRC1Q6PGN9 363 aaPredicted RBP24.19■■□□□ 1.46
LIME1-204ENST00000476183 VPS54Q9P1Q0 977 aa24.19■■□□□ 1.46
LIME1-204ENST00000476183 H3BRB1 525 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 PITPNM1O00562 1244 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 TRIM50Q86XT4 487 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 GIMAP8Q8ND71 665 aaPredicted RBP24.18■■□□□ 1.46
LIME1-204ENST00000476183 CCDC12Q8WUD4 166 aaPredicted RBP24.18■■□□□ 1.46
LIME1-204ENST00000476183 TUT1Q9H6E5 874 aaKnown RBP24.18■■□□□ 1.46
LIME1-204ENST00000476183 C6orf50Q9HD87 102 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 KCNH7Q9NS40 1196 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 TPCN1Q9ULQ1 816 aa24.18■■□□□ 1.46
LIME1-204ENST00000476183 TANC1Q9C0D5 1861 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 MAFGO15525 162 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 ARP10275 920 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 ARHGAP4P98171 946 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 CEP55Q53EZ4 464 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 UTP14CQ5TAP6 766 aaKnown RBP24.17■■□□□ 1.46
LIME1-204ENST00000476183 FAM109BQ6ICB4 259 aaPredicted RBP24.17■■□□□ 1.46
LIME1-204ENST00000476183 DEFB123Q8N688 67 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 RASGRP4Q8TDF6 673 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 CRYGNQ8WXF5 182 aa24.17■■□□□ 1.46
LIME1-204ENST00000476183 CPLX1O14810 134 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 IQCF3P0C7M6 154 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 SMAD3P84022 425 aaKnown RBP24.16■■□□□ 1.46
LIME1-204ENST00000476183 SSRP1Q08945 709 aaKnown RBP24.16■■□□□ 1.46
LIME1-204ENST00000476183 SCRN1Q12765 414 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 BFSP2Q13515 415 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 REXO1Q8N1G1 1221 aaKnown RBP24.16■■□□□ 1.46
LIME1-204ENST00000476183 HERVK_113Q902F9 699 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 WNT8BQ93098 351 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 CXXC1Q9P0U4 656 aaPredicted RBP24.16■■□□□ 1.46
LIME1-204ENST00000476183 TET1Q8NFU7 2136 aa24.16■■□□□ 1.46
LIME1-204ENST00000476183 GSTTP1A0A1W2PQM5 241 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 MEIS1O00470 390 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 FGBP02675 491 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 SMIM10L2AP0DMW4 78 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 SMIM10L2BP0DMW5 78 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 GNA11P29992 359 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 HOXC8P31273 242 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 AK2P54819 239 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 TRIM22Q8IYM9 498 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 RETREG2Q8NC44 543 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 CAGE1Q8TC20 777 aa24.15■■□□□ 1.46
LIME1-204ENST00000476183 FAM86B1E9PN63 330 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 RBAK-RBAKDNI3L0D1 243 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 FAM86B2P0C5J1 330 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 TCF7P36402 384 aaPredicted RBP24.14■■□□□ 1.45
LIME1-204ENST00000476183 ITGB3BPQ13352 177 aaPredicted RBP24.14■■□□□ 1.45
LIME1-204ENST00000476183 TRIM71Q2Q1W2 868 aaKnown RBP24.14■■□□□ 1.45
LIME1-204ENST00000476183 OTOP2Q7RTS6 562 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 DEFB128Q7Z7B8 93 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 RPUSD2Q8IZ73 545 aaKnown RBP24.14■■□□□ 1.45
LIME1-204ENST00000476183 CCDC148Q8NFR7 591 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 SEPT1Q8WYJ6 367 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 AIFM3Q96NN9 605 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 CDH23Q9H251 3354 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 AGO4Q9HCK5 861 aaKnown RBP24.14■■□□□ 1.45
LIME1-204ENST00000476183 SH3GLB2Q9NR46 395 aa24.14■■□□□ 1.45
LIME1-204ENST00000476183 PFKFB2O60825 505 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 EIF5BO60841 1220 aaKnown RBP24.13■■□□□ 1.45
LIME1-204ENST00000476183 DTNBO60941 627 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 DEXIO95424 95 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 CYP3A4P08684 503 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 RBL2Q08999 1139 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 PTK7Q13308 1070 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 C8orf34Q49A92 452 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
LIME1-204ENST00000476183 RNPEPQ9H4A4 650 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 JPH1Q9HDC5 661 aaPredicted RBP24.13■■□□□ 1.45
LIME1-204ENST00000476183 MTMR10Q9NXD2 777 aa24.13■■□□□ 1.45
LIME1-204ENST00000476183 COL6A3P12111 3177 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms