RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-205ENST00000475944 RAPGEFL1Q9UHV5 662 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 FIBPO43427 364 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 CYTH3O43739 400 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 CYP21A2P08686 494 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 GSPT1P15170 499 aaKnown RBP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 ICAM3P32942 547 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 HTRA4P83105 476 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 TROAPQ12815 778 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 TTC22Q5TAA0 569 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 NCOA7Q8NI08 942 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 SEPT8Q92599 483 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 SAMD11Q96NU1 681 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 RNPEPQ9H4A4 650 aa12.52□□□□□ -0.41
CDRT1-205ENST00000475944 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 ZNF215Q9UL58 517 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-205ENST00000475944 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 E7EWF7 191 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 TREHO43280 583 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 PLA2G5P39877 138 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
CDRT1-205ENST00000475944 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-205ENST00000475944 CUL5Q93034 780 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 C17orf80Q9BSJ5 609 aa12.51□□□□□ -0.41
CDRT1-205ENST00000475944 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 CTSHP09668 335 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 CHMLP26374 656 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 KIF5BP33176 963 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 PTH1RQ03431 593 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 PTPROQ16827 1216 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 XRRA1Q6P2D8 792 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-205ENST00000475944 SMARCC2Q8TAQ2 1214 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 APBB2Q92870 758 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 MRPL38Q96DV4 380 aaKnown RBP12.5□□□□□ -0.41
CDRT1-205ENST00000475944 FAM122AQ96E09 287 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 GPR20Q99678 358 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 EPHX3Q9H6B9 360 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 RTEL1Q9NZ71 1219 aa12.5□□□□□ -0.41
CDRT1-205ENST00000475944 COL4A6Q14031 1691 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
CDRT1-205ENST00000475944 KCNA5P22460 613 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 PDE4AP27815 886 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 LEXMQ3ZCV2 418 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 EPC2Q52LR7 807 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 TIGD5Q53EQ6 642 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 TRIM50Q86XT4 487 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 GIMAP8Q8ND71 665 aaPredicted RBP12.49□□□□□ -0.41
CDRT1-205ENST00000475944 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 RRP36Q96EU6 259 aaKnown RBP12.49□□□□□ -0.41
CDRT1-205ENST00000475944 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
CDRT1-205ENST00000475944 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
CDRT1-205ENST00000475944 HCN4Q9Y3Q4 1203 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 NCOR1O75376 2440 aa12.49□□□□□ -0.41
CDRT1-205ENST00000475944 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 SGSM2O43147 1006 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 DDAH1O94760 285 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 UPP2O95045 317 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 SMARCA1P28370 1054 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 ANTXR2P58335 489 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 ADAM17P78536 824 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 ARHGAP4P98171 946 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 SP4Q02446 784 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 UTP14CQ5TAP6 766 aaKnown RBP12.48□□□□□ -0.41
CDRT1-205ENST00000475944 USP17L6PQ6QN14 398 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
CDRT1-205ENST00000475944 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-205ENST00000475944 TAF6LQ9Y6J9 622 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
CDRT1-205ENST00000475944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-205ENST00000475944 H3BNC9 293 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 MEIS2O14770 477 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 GPR37L1O60883 481 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 GNAQP50148 359 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 GPM6BQ13491 265 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
CDRT1-205ENST00000475944 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms