RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 NHSQ6T4R5 1651 aa19.5■□□□□ 0.71
CCM2-207ENST00000475551 MYCNP04198 464 aaPredicted RBP19.49■□□□□ 0.71
CCM2-207ENST00000475551 CTNNA1P35221 906 aaKnown RBP19.49■□□□□ 0.71
CCM2-207ENST00000475551 NBPF9Q3BBW0 867 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 GALNT17Q6IS24 598 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 ERCC3P19447 782 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 KLRC1P26715 233 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 TXNRD1Q16881 649 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 INF2Q27J81 1249 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 EP400NLQ6ZTU2 488 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 RAPGEF5Q92565 580 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 GPKOWQ92917 476 aaPredicted RBP eCLIP19.49■□□□□ 0.71
CCM2-207ENST00000475551 SLC39A2Q9NP94 309 aa19.49■□□□□ 0.71
CCM2-207ENST00000475551 NMT2O60551 498 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 ZPR1O75312 459 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 TMOD1P28289 359 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 EHHADHQ08426 723 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 MTMR3Q13615 1198 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 GKAP1Q5VSY0 366 aaPredicted RBP19.48■□□□□ 0.71
CCM2-207ENST00000475551 KLHL7Q8IXQ5 586 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 CCT6BQ92526 530 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 CEP72Q9P209 647 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 DNA2P51530 1060 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 LRRC63Q05C16 580 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 SFMBT2Q5VUG0 894 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 STAG2Q8N3U4 1231 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 OR2W6PQ8NHA6 318 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 SCFD2Q8WU76 684 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 FAM212AQ96EL1 285 aa19.48■□□□□ 0.71
CCM2-207ENST00000475551 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.48■□□□□ 0.71
CCM2-207ENST00000475551 A0A1B0GUA9 196 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 TRIM37O94972 964 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 SSBP05455 408 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCM2-207ENST00000475551 SATB1Q01826 763 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 KCNMA1Q12791 1236 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 GUF1Q8N442 669 aaKnown RBP19.47■□□□□ 0.71
CCM2-207ENST00000475551 HPS3Q969F9 1004 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 FAXDC2Q96IV6 333 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 CNOT8Q9UFF9 292 aaKnown RBP19.47■□□□□ 0.71
CCM2-207ENST00000475551 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 BAZ2BQ9UIF8 2168 aaKnown RBP19.47■□□□□ 0.71
CCM2-207ENST00000475551 TLR2O60603 784 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 OR52Z1P0C646 297 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 DYNLL1P63167 89 aaKnown RBP19.47■□□□□ 0.71
CCM2-207ENST00000475551 SLC18A3Q16572 532 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 ODF2Q5BJF6 829 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 FOXR2Q6PJQ5 311 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 TMED8Q6PL24 325 aaPredicted RBP19.47■□□□□ 0.71
CCM2-207ENST00000475551 TAF4BQ92750 862 aa19.47■□□□□ 0.71
CCM2-207ENST00000475551 PVALEFA0A1B0GWK0 134 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 HOXA7P31268 230 aaPredicted RBP19.46■□□□□ 0.71
CCM2-207ENST00000475551 LRRC55Q6ZSA7 311 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 HVCN1Q96D96 273 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 CALR3Q96L12 384 aaKnown RBP19.46■□□□□ 0.71
CCM2-207ENST00000475551 PACSIN2Q9UNF0 486 aaPredicted RBP19.46■□□□□ 0.71
CCM2-207ENST00000475551 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 MYH1P12882 1939 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 BTAF1O14981 1849 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
CCM2-207ENST00000475551 USP17L12C9JPN9 530 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 USP17L21D6R901 530 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 RNASE9P60153 205 aaKnown RBP19.46■□□□□ 0.71
CCM2-207ENST00000475551 UNC13DQ70J99 1090 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 ACTRT1Q8TDG2 376 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 TBC1D22AQ8WUA7 517 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 PBKQ96KB5 322 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
CCM2-207ENST00000475551 CICQ96RK0 1608 aaPredicted RBP19.45■□□□□ 0.7
CCM2-207ENST00000475551 BTNL10A8MVZ5 291 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 DRD4P21917 467 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 CLNS1AP54105 237 aaKnown RBP19.45■□□□□ 0.7
CCM2-207ENST00000475551 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 FMNL3Q8IVF7 1028 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 BCCIPQ9P287 314 aaKnown RBP eCLIP19.45■□□□□ 0.7
CCM2-207ENST00000475551 NOVA2Q9UNW9 492 aaKnown RBP19.45■□□□□ 0.7
CCM2-207ENST00000475551 PPIP5K2O43314 1243 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 RPS6KA1Q15418 735 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 FAM83BQ5T0W9 1011 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 CENPTQ96BT3 561 aa19.45■□□□□ 0.7
CCM2-207ENST00000475551 CNOT10Q9H9A5 744 aaKnown RBP19.45■□□□□ 0.7
CCM2-207ENST00000475551 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 RTN2O75298 545 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 NOL4O94818 638 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 ELF3P78545 371 aaPredicted RBP19.44■□□□□ 0.7
CCM2-207ENST00000475551 E2F5Q15329 346 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 KIAA0753Q2KHM9 967 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 SV2BQ7L1I2 683 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 TBC1D5Q92609 795 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 ANKS1AQ92625 1134 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 SLC4A9Q96Q91 983 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 NLRC4Q9NPP4 1024 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 FBXL5Q9UKA1 691 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 CACNA1SQ13698 1873 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
CCM2-207ENST00000475551 PPP1R12AO14974 1030 aaPredicted RBP19.44■□□□□ 0.7
CCM2-207ENST00000475551 SLC8A3P57103 927 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms