RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 HABP4Q5JVS0 413 aaKnown RBP9.53□□□□□ -0.88
SMC5-203ENST00000475540 C16orf59Q7L2K0 433 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 LINC01356Q8N9X3 169 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 GSTCDQ8NEC7 633 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 CLEC4DQ8WXI8 215 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 ZBTB8AQ96BR9 441 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 NOX5Q96PH1 765 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 KRTAP4-7Q9BYR0 210 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
SMC5-203ENST00000475540 PLD2O14939 933 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 TUSC3Q13454 348 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 SQSTM1Q13501 440 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 LCE1DQ5T752 114 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 EP400NLQ6ZTU2 488 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 GORASP1Q9BQQ3 440 aa9.52□□□□□ -0.89
SMC5-203ENST00000475540 KCNQ2O43526 872 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
SMC5-203ENST00000475540 PYGMP11217 842 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 GRIN1Q05586 938 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 CRY1Q16526 586 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 TEPPQ6URK8 271 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 SAPCD2Q86UD0 394 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 RBM12BQ8IXT5 1001 aaKnown RBP9.51□□□□□ -0.89
SMC5-203ENST00000475540 LINC00482Q8N8I6 264 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 C11orf84Q9BUA3 381 aaPredicted RBP9.51□□□□□ -0.89
SMC5-203ENST00000475540 KANSL2Q9H9L4 492 aa9.51□□□□□ -0.89
SMC5-203ENST00000475540 FFAR3O14843 346 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 LRG1P02750 347 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 BMP7P18075 431 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 GPR19Q15760 415 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 ARHGAP36Q6ZRI8 547 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.5□□□□□ -0.89
SMC5-203ENST00000475540 NLGN4XQ8N0W4 816 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 KYQ8NBH2 561 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 SYT3Q9BQG1 590 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 TMEM260Q9NX78 707 aa9.5□□□□□ -0.89
SMC5-203ENST00000475540 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 DNM2P50570 870 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 SMAD4Q13485 552 aaKnown RBP9.49□□□□□ -0.89
SMC5-203ENST00000475540 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
SMC5-203ENST00000475540 SPOCD1Q6ZMY3 1216 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 KCTD1Q719H9 257 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 BRAPQ7Z569 592 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 STK32CQ86UX6 486 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 OSTM1Q86WC4 334 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 TTLL6Q8N841 843 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 ZNF526Q8TF50 670 aaPredicted RBP9.49□□□□□ -0.89
SMC5-203ENST00000475540 SCLYQ96I15 445 aa9.49□□□□□ -0.89
SMC5-203ENST00000475540 RNPC3Q96LT9 517 aaKnown RBP9.49□□□□□ -0.89
SMC5-203ENST00000475540 CCDC66A2RUB6 948 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 RASGRP1O95267 797 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 LTFP02788 710 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 PDE6AP16499 860 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 VWA3BQ502W6 1294 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 PDGFDQ9GZP0 370 aaPredicted RBP9.48□□□□□ -0.89
SMC5-203ENST00000475540 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
SMC5-203ENST00000475540 TCRBV5S4A2TA0A5A2 114 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 ESYT3A0FGR9 886 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 SH3D21A4FU49 640 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 KRT15P19012 456 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 RANGAP1P46060 587 aaPredicted RBP9.47□□□□□ -0.89
SMC5-203ENST00000475540 EPHA5P54756 1037 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 ITGA1P56199 1179 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 PAN2Q504Q3 1202 aaKnown RBP9.47□□□□□ -0.89
SMC5-203ENST00000475540 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
SMC5-203ENST00000475540 SPATA6Q9NWH7 488 aaPredicted RBP9.47□□□□□ -0.89
SMC5-203ENST00000475540 NTMQ9P121 344 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
SMC5-203ENST00000475540 ARID1BQ8NFD5 2236 aaPredicted RBP9.47□□□□□ -0.89
SMC5-203ENST00000475540 SASH1O94885 1247 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 ASMTLO95671 621 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 FAHP16930 419 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 FBLN7Q53RD9 439 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 FGD2Q7Z6J4 655 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 ADGRG2Q8IZP9 1017 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 SYNPOQ8N3V7 929 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 TP53I13Q8NBR0 393 aaPredicted RBP9.46□□□□□ -0.9
SMC5-203ENST00000475540 SH3RF2Q8TEC5 729 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 CD244Q9BZW8 370 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 ZCCHC4Q9H5U6 513 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 TRIM39Q9HCM9 518 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
SMC5-203ENST00000475540 TCRBV16S1A1N1A0A5B0 115 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
SMC5-203ENST00000475540 CKMP06732 381 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 SARSP49591 514 aaKnown RBP9.45□□□□□ -0.9
SMC5-203ENST00000475540 JAM2P57087 298 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 LACTBP83111 547 aaPredicted RBP9.45□□□□□ -0.9
SMC5-203ENST00000475540 BTBD8Q5XKL5 378 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 LIPIQ6XZB0 460 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 PTRH1Q86Y79 214 aaKnown RBP9.45□□□□□ -0.9
SMC5-203ENST00000475540 TMEM209Q96SK2 561 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 SRPK3Q9UPE1 567 aa9.45□□□□□ -0.9
SMC5-203ENST00000475540 COQ6Q9Y2Z9 468 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms