RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SP2Q02086 613 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 PTPN11Q06124 597 aaPredicted RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 PTGISQ16647 500 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 HSDL1Q3SXM5 330 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 FAM109BQ6ICB4 259 aaPredicted RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 PSRC1Q6PGN9 363 aaPredicted RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 BLOC1S2Q6QNY1 142 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 C16orf59Q7L2K0 433 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 C7orf31Q8N865 590 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 PPTC7Q8NI37 304 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
PDPN-204ENST00000475043 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 KATNAL1Q9BW62 490 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 SCN5AQ14524 2016 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 FRMPD4Q14CM0 1322 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 NOP56O00567 594 aaKnown RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 FGBP02675 491 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 PSEN2P49810 448 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 APOBRQ0VD83 1088 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 MFSD10Q14728 455 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 UBE2SQ16763 222 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 KIAA0753Q2KHM9 967 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 Q6ZUG5 572 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 OTOP2Q7RTS6 562 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 DEFB128Q7Z7B8 93 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 RPUSD2Q8IZ73 545 aaKnown RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 KAT2BQ92831 832 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 MTIF3Q9H2K0 278 aaKnown RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
PDPN-204ENST00000475043 CNTNAP5Q8WYK1 1306 aa10.83□□□□□ -0.68
PDPN-204ENST00000475043 FIBPO43427 364 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 F2P00734 622 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 PSMA5P28066 241 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 METAP2P50579 478 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDPN-204ENST00000475043 NAPAP54920 295 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 SP4Q02446 784 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 BFSP2Q13515 415 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 NEDD9Q14511 834 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
PDPN-204ENST00000475043 CYFIP1Q7L576 1253 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 NLRX1Q86UT6 975 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 CCDC155Q8N6L0 562 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 KCNB2Q92953 911 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 BRF1Q92994 677 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
PDPN-204ENST00000475043 BCAS3Q9H6U6 928 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 PPP4R2Q9NY27 417 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 HDAC6Q9UBN7 1215 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 GBF1Q92538 1859 aa10.82□□□□□ -0.68
PDPN-204ENST00000475043 TRIP12Q14669 1992 aaPredicted RBP10.81□□□□□ -0.68
PDPN-204ENST00000475043 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
PDPN-204ENST00000475043 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 GRXCR1A8MXD5 290 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 SPATA31C2B4DYI2 1134 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
PDPN-204ENST00000475043 IQCF3P0C7M6 154 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 RPS6KB1P23443 525 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 DNAJB2P25686 324 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 CDC27P30260 824 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 ICAM3P32942 547 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 XRRA1Q6P2D8 792 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 SESTD1Q86VW0 696 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 HERVK_113Q902F9 699 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 GUCD1Q96NT3 240 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 SEMA6BQ9H3T3 888 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 CXXC1Q9P0U4 656 aaPredicted RBP10.81□□□□□ -0.68
PDPN-204ENST00000475043 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 PCDHA6Q9UN73 950 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 STXBP5LQ9Y2K9 1186 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 PCDHA8Q9Y5H6 950 aa10.81□□□□□ -0.68
PDPN-204ENST00000475043 H3BRB1 525 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 HAS3O00219 553 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
PDPN-204ENST00000475043 PFKMP08237 780 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 ACTN1P12814 892 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
PDPN-204ENST00000475043 PBX2P40425 430 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 ADCY7P51828 1080 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 RCAN1P53805 252 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
PDPN-204ENST00000475043 FUT2Q10981 343 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 MTMR1Q13613 665 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 RASIP1Q5U651 963 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 METTL7BQ6UX53 244 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms