RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 NCAPH2Q6IBW4 605 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 ZNF746Q6NUN9 644 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CABP7Q86V35 215 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 SMAP1Q8IYB5 467 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CYP2W1Q8TAV3 490 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CCDC43Q96MW1 224 aaKnown RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CLIC6Q96NY7 704 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CCSER1Q9C0I3 900 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 JPH1Q9HDC5 661 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 DDX19AQ9NUU7 478 aaKnown RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 SRRDQ9UH36 339 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 GJD2Q9UKL4 321 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 WDR64B1ANS9 1081 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 WNT7AO00755 349 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 CTAGE5O15320 804 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 PSMD10O75832 226 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 GH1P01241 217 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 PSAPP07602 524 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 MUTP22033 750 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 ACVR2BQ13705 512 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 LAMC2Q13753 1193 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 EPHA7Q15375 998 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 AXDND1Q5T1B0 1012 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 MIS18BP1Q6P0N0 1132 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 OTOP1Q7RTM1 612 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 IGSF22Q8N9C0 903 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 SNX29Q8TEQ0 813 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 USP6NLQ92738 828 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 HAS1Q92839 578 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 CCDC47Q96A33 483 aaKnown RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 LENG9Q96B70 501 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 BMP2KQ9NSY1 1161 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 ZHX1Q9UKY1 873 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-206ENST00000474564 FAM184BQ9ULE4 1060 aa11.62□□□□□ -0.55
COL12A1-206ENST00000474564 A0A1B0GVL5 298 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 DDX39AO00148 427 aaKnown RBP11.61□□□□□ -0.55
COL12A1-206ENST00000474564 CHMP2AO43633 222 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-206ENST00000474564 ZNF202O95125 648 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 PFKFB1P16118 471 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 STAT6P42226 847 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 FAM160B1Q5W0V3 765 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 NPLOC4Q8TAT6 608 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 ZNF296Q8WUU4 475 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-206ENST00000474564 ATP6V0A1Q93050 837 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 AP5M1Q9H0R1 490 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 R3HDMLQ9H3Y0 253 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 MAGEF1Q9HAY2 307 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 TUFT1Q9NNX1 390 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 DISC1Q9NRI5 854 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 PCDHA10Q9Y5I2 948 aa11.61□□□□□ -0.55
COL12A1-206ENST00000474564 BACH1O14867 736 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
COL12A1-206ENST00000474564 EDIL3O43854 480 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 ADCY3O60266 1144 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 GGPS1O95749 300 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
COL12A1-206ENST00000474564 CNGA1P29973 690 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 PRKCZQ05513 592 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 SPECC1Q5M775 1068 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 METTL7BQ6UX53 244 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 TPH2Q8IWU9 490 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-206ENST00000474564 PDILTQ8N807 584 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 UIMC1Q96RL1 719 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-206ENST00000474564 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 ZSWIM4Q9H7M6 989 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
COL12A1-206ENST00000474564 DNM3Q9UQ16 869 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
COL12A1-206ENST00000474564 PLXNB2O15031 1838 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms