RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SEMA3FQ13275 785 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 APOA5Q6Q788 366 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 SKAP1Q86WV1 359 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 RAB11FIP4Q86YS3 637 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 CCDC82Q8N4S0 544 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 GPRASP2Q96D09 838 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 GPR20Q99678 358 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 COL25A1Q9BXS0 654 aaPredicted RBP23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 EHMT1Q9H9B1 1298 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 ZNF215Q9UL58 517 aaPredicted RBP23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 DOCK5Q9H7D0 1870 aa23.39■■□□□ 1.33
PDLIM4-206ENST00000474421 EMSYQ7Z589 1322 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 GNAT1P11488 350 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 IGFBP4P22692 258 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 GPNMBQ14956 572 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 TRIM71Q2Q1W2 868 aaKnown RBP23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 HEATR3Q7Z4Q2 680 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 SERINC5Q86VE9 423 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 ATP6V0A1Q93050 837 aa23.38■■□□□ 1.33
PDLIM4-206ENST00000474421 KAT6AQ92794 2004 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 ABHD14A-ACY1A0A1B0GW23 586 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 ZBTB43O43298 467 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 NBNO60934 754 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 CA3P07451 260 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 SMIM10L2AP0DMW4 78 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 SMIM10L2BP0DMW5 78 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 HOXC8P31273 242 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 ZNF200P98182 395 aaPredicted RBP23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 RTN1Q16799 776 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 ZNF618Q5T7W0 954 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 USP38Q8NB14 1042 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 BCAS3Q9H6U6 928 aa23.37■■□□□ 1.33
PDLIM4-206ENST00000474421 hCG_1642624A0A1W2PR95 340 aa23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 CAND2O75155 1236 aa23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 THPOP40225 353 aa23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 WDR5P61964 334 aaKnown RBP23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 ADGRE1Q14246 886 aa23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 SYMPKQ92797 1274 aaKnown RBP23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 VCANP13611 3396 aa23.36■■□□□ 1.33
PDLIM4-206ENST00000474421 MAFGO15525 162 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 RCAN1P53805 252 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 IKBKEQ14164 716 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 HIC1Q14526 733 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 PPP1R18Q6NYC8 613 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 TRAF7Q6Q0C0 670 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 RASEFQ8IZ41 740 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 WNT8BQ93098 351 aa23.35■■□□□ 1.33
PDLIM4-206ENST00000474421 CNTNAP5Q8WYK1 1306 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 RSPH10B2B2RC85 870 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 hCG_1984214I3L0E3 225 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 TLL1O43897 1013 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 LGR5O75473 907 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 RSPH10BP0C881 870 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 FGD1P98174 961 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 UBE2SQ16763 222 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 ZNF713Q8N859 430 aaPredicted RBP23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 PPM1EQ8WY54 764 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 CCDC136Q96JN2 1154 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 RNPEPQ9H4A4 650 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 PCDHA6Q9UN73 950 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 PCDHA8Q9Y5H6 950 aa23.34■■□□□ 1.33
PDLIM4-206ENST00000474421 KCNA2P16389 499 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 ITGB5P18084 799 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 NAPAP54920 295 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 SP4Q02446 784 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 MTMR1Q13613 665 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 ADCK5Q3MIX3 580 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 UTP14CQ5TAP6 766 aaKnown RBP23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 TCEANC2Q96MN5 208 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 ZBED2Q9BTP6 218 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 GLT8D2Q9H1C3 349 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 BRPF3Q9ULD4 1205 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 UBIAD1Q9Y5Z9 338 aa23.33■■□□□ 1.33
PDLIM4-206ENST00000474421 PTPRSQ13332 1948 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 TRANK1O15050 2925 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 KLF18A0A0U1RQI7 1052 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 GOLGA8AA7E2F4 631 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 GOLGA8BA8MQT2 603 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 TREHO43280 583 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 WWC2Q6AWC2 1192 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 SEPT1Q8WYJ6 367 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 TSPYL2Q9H2G4 693 aaPredicted RBP23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 RIC8AQ9NPQ8 531 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 JADE2Q9NQC1 790 aa23.32■■□□□ 1.32
PDLIM4-206ENST00000474421 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 GTPBP6O43824 516 aaPredicted RBP23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 TAP1Q03518 808 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 FUT2Q10981 343 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 MBTPS1Q14703 1052 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 TJAP1Q5JTD0 557 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 TRIM50Q86XT4 487 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 ATXN2LQ8WWM7 1075 aaKnown RBP23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 SETD4Q9NVD3 440 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 V9GY48 417 aaPredicted RBP23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 NRCAMQ92823 1304 aa23.31■■□□□ 1.32
PDLIM4-206ENST00000474421 ATP9AO75110 1047 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 POU3F3P20264 500 aaPredicted RBP23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 TCF7P36402 384 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms