RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SQSTM1Q13501 440 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 CST9Q5W186 159 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 NUGGCQ68CJ6 796 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TMEM151BQ8IW70 566 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 NKAPQ8N5F7 415 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 GOLGA6L1Q8N7Z2 621 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 RNF166Q96A37 237 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 PLEKHG4BQ96PX9 1271 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 NUDT16L1Q9BRJ7 211 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 ALG1Q9BT22 464 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 KATNAL1Q9BW62 490 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TBC1D22BQ9NU19 505 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 PPARGC1AQ9UBK2 798 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 AGTPBP1Q9UPW5 1226 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 PCDHGB3Q9Y5G1 929 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 MUC6Q6W4X9 2439 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 ANO9A1A5B4 782 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 VSTM5A8MXK1 200 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 KLF4O43474 513 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TIPRLO75663 272 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 IL33O95760 270 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 EPHX2P34913 555 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 MAN2A2P49641 1150 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 APOBRQ0VD83 1088 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 SFMBT2Q5VUG0 894 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 SPATA1Q5VX52 437 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 OLFML1Q6UWY5 402 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 RNF135Q8IUD6 432 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TNIP2Q8NFZ5 429 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TEKT4Q8WW24 435 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 GPRASP2Q96D09 838 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 RBCK1Q9BYM8 510 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 HELLSQ9NRZ9 838 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 NKIRAS2Q9NYR9 191 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 LAMP5Q9UJQ1 280 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 ZNF112Q9UJU3 913 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 PCDHGC5Q9Y5F6 944 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 BRCA1P38398 1863 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 USP31Q70CQ4 1352 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 KATNA1O75449 491 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 BAG4O95429 457 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 PGRP06401 933 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 MMP10P09238 476 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 TNNT1P13805 278 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 MUTP22033 750 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GARTP22102 1010 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 STAT3P40763 770 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 MAPK8P45983 427 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ZNF280AP59817 542 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 IKQ13123 557 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 PSMD6Q15008 389 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GNPTABQ3T906 1256 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 HECTD3Q5T447 861 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 TOM1L2Q6ZVM7 507 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CEP68Q76N32 757 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 RALYLQ86SE5 291 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 RETREG3Q86VR2 466 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 TEX11Q8IYF3 940 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 VPS52Q8N1B4 723 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GOLGA5Q8TBA6 731 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 TMC1Q8TDI8 760 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GJA10Q969M2 543 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GIMAP2Q9UG22 337 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 NOD1Q9Y239 953 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ANGPTL3Q9Y5C1 460 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ALS2Q96Q42 1657 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ERLIN1O75477 346 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CYP1A2P05177 515 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 TRIM21P19474 475 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 RDXP35241 583 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 GNL1P36915 607 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CD86P42081 329 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 POLR2FP61218 127 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CACNB2Q08289 660 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 PDE12Q6L8Q7 609 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 THNSL2Q86YJ6 484 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 FAM26EQ8N5C1 309 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 EPS8L3Q8TE67 593 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 ZNF296Q8WUU4 475 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 LRRC45Q96CN5 670 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 C8orf76Q96K31 380 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CNDP2Q96KP4 475 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 NAP1L3Q99457 506 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CRACR2AQ9BSW2 395 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 KCTD10Q9H3F6 313 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 UBAP1Q9NZ09 502 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 DUSP12Q9UNI6 340 aa6.79□□□□□ -1.32
SMARCE1-208ENST00000474246 CPDO75976 1380 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 CRYBG1Q9Y4K1 1723 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 MCF2LO15068 1137 aa6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 POLR3GO15318 223 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-208ENST00000474246 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms