RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CAMK4Q16566 473 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 POTEEQ6S8J3 1075 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 CYP2W1Q8TAV3 490 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 HAS1Q92839 578 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 SLC5A5Q92911 643 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 INPP4AQ96PE3 977 aaPredicted RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 PANK2Q9BZ23 570 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 DIS3Q9Y2L1 958 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.56
PRPF38A-202ENST00000474048 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 SOWAHBA6NEL2 793 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 WDR64B1ANS9 1081 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 TRPA1O75762 1119 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 NEDD9Q14511 834 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 TTLL4Q14679 1199 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 KRBA2Q6ZNG9 492 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 ARMCX2Q7L311 632 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 EEPD1Q7L9B9 569 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 LENG9Q96B70 501 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 APBA2Q99767 749 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 VTA1Q9NP79 307 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 HPSEQ9Y251 543 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 MGAMO43451 1857 aa11.52□□□□□ -0.57
PRPF38A-202ENST00000474048 LOXHD1Q8IVV2 1947 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SYCE3A1L190 88 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 PSMD10O75832 226 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 TBC1D8O95759 1140 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 CCDC192P0DO97 292 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 TGFB3P10600 412 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 PLCG1P19174 1290 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 EDNRBP24530 442 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 CDC25AP30304 524 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 PSMC4P43686 418 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SP4Q02446 784 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SP3Q02447 781 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 IL17AQ16552 155 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 ZNF792Q3KQV3 632 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 KCTD17Q8N5Z5 321 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 RDM1Q8NG50 284 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 GJA10Q969M2 543 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 PLIN2Q99541 437 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 TUFT1Q9NNX1 390 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 ZHX1Q9UKY1 873 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 NFASCO94856 1347 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
PRPF38A-202ENST00000474048 SPATA31C2B4DYI2 1134 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 BACH1O14867 736 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 PSAPP07602 524 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 MUTP22033 750 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 ICAM3P32942 547 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 AFMP43652 599 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 LACTBP83111 547 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 CYP4A11Q02928 519 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 POSTNQ15063 836 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 EPHA7Q15375 998 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 TPH2Q8IWU9 490 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 FBXO16Q8IX29 292 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 ENGASEQ8NFI3 743 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 ATP6V0A1Q93050 837 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 MAML3Q96JK9 1138 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 SENP7Q9BQF6 1050 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 EIF2AK1Q9BQI3 630 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 UNC45AQ9H3U1 944 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms