RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PSMC4P43686 418 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 TOB1P50616 345 aaPredicted RBP8.64□□□□□ -1.03
CCDC93-207ENST00000474006 USP11P51784 963 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 LACTBP83111 547 aaPredicted RBP8.64□□□□□ -1.03
CCDC93-207ENST00000474006 AP3B2Q13367 1082 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 NONOQ15233 471 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC93-207ENST00000474006 INF2Q27J81 1249 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 ARHGEF16Q5VV41 709 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 DPP9Q86TI2 863 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 FAM133AQ8N9E0 248 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
CCDC93-207ENST00000474006 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 RMDN3Q96TC7 470 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 ANO3Q9BYT9 981 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
CCDC93-207ENST00000474006 GJD2Q9UKL4 321 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 MYH4Q9Y623 1939 aa8.64□□□□□ -1.03
CCDC93-207ENST00000474006 FKTNO75072 461 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 FCGRTP55899 365 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 UBXN2AP68543 259 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 GRB14Q14449 540 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 KIF22Q14807 665 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF174Q15697 407 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF792Q3KQV3 632 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 DNERQ8NFT8 737 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
CCDC93-207ENST00000474006 CHAMP1Q96JM3 812 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 TRIM47Q96LD4 638 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 TRAIPQ9BWF2 469 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 ARHGAP39Q9C0H5 1083 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
CCDC93-207ENST00000474006 RPTORQ8N122 1335 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CYP3A7-CYP3A51PA0A087WV96 503 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 WNT7AO00755 349 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 TNPO2O14787 897 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CCNT1O60563 726 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 NR3C2P08235 984 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CYP3A4P08684 503 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 MYCLP12524 364 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CYP3A7P24462 503 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF76P36508 570 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 SREBF1P36956 1147 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 TRAPPC10P48553 1259 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 PTPN5P54829 565 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 ARHGAP4P98171 946 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CAP1Q01518 475 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CEBPZQ03701 1054 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 PGM5Q15124 567 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 LETM2Q2VYF4 491 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 RILPL1Q5EBL4 403 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CD99L2Q8TCZ2 262 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF296Q8WUU4 475 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CRYGNQ8WXF5 182 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 USP6NLQ92738 828 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 ZNF396Q96N95 335 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 IWS1Q96ST2 819 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 PDCD2LQ9BRP1 358 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 SLC6A16Q9GZN6 736 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 RTEL1Q9NZ71 1219 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 ADD3Q9UEY8 706 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 NOL7Q9UMY1 257 aaKnown RBP8.62□□□□□ -1.03
CCDC93-207ENST00000474006 PCDHB6Q9Y5E3 794 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 CLIC4Q9Y696 253 aa8.62□□□□□ -1.03
CCDC93-207ENST00000474006 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 ASTN1O14525 1302 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 FAM86B1E9PN63 330 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 FAM86B2P0C5J1 330 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 CYP2B6P20813 491 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 CIITAP33076 1130 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 MCM7P33993 719 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 MRPS9P82933 396 aaKnown RBP8.61□□□□□ -1.03
CCDC93-207ENST00000474006 PTK2Q05397 1052 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 STXBP2Q15833 593 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 PCNX4Q63HM2 1172 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 ATL3Q6DD88 541 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 XRRA1Q6P2D8 792 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 C4orf32Q8N8J7 132 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 JMYQ8N9B5 988 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 IL31RAQ8NI17 732 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 NPLOC4Q8TAT6 608 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 CYP2W1Q8TAV3 490 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 FGD4Q96M96 766 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC93-207ENST00000474006 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
CCDC93-207ENST00000474006 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms