RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CTTNQ14247 550 aaKnown RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 NR1I3Q14994 352 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 KRT31Q15323 416 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 EAPPQ56P03 285 aaPredicted RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 ARSHQ5FYA8 562 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CNNM4Q6P4Q7 775 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 RNF207Q6ZRF8 634 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CCDC47Q96A33 483 aaKnown RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 DUSP9Q99956 384 aaKnown RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 UNC45AQ9H3U1 944 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CSADQ9Y600 493 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 COASYQ13057 564 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
VARS2-206ENST00000473916 LRRC41Q15345 812 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 ANKRD40Q6AI12 368 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 ADD3Q9UEY8 706 aaKnown RBP20.09■□□□□ 0.81
VARS2-206ENST00000473916 LOC285556D6RIA3 1793 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 KIAA1217Q5T5P2 1943 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 KCNJ18B7U540 433 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 IPO5O00410 1097 aaKnown RBP20.09■□□□□ 0.81
VARS2-206ENST00000473916 ZBTB39O15060 712 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 PPP2R5CQ13362 524 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 STIM1Q13586 685 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 KCNJ12Q14500 433 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 NOLC1Q14978 699 aaKnown RBP eCLIP20.09■□□□□ 0.81
VARS2-206ENST00000473916 PGM5Q15124 567 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 SH3D19Q5HYK7 790 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
VARS2-206ENST00000473916 DYDC2Q96IM9 177 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 TRIM47Q96LD4 638 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 KCNH7Q9NS40 1196 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 TAB2Q9NYJ8 693 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 TBC1D7Q9P0N9 293 aa20.09■□□□□ 0.81
VARS2-206ENST00000473916 FRMPD4Q14CM0 1322 aa20.08■□□□□ 0.81
VARS2-206ENST00000473916 IRF6O14896 467 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 SETQ01105 290 aaPredicted RBP20.08■□□□□ 0.8
VARS2-206ENST00000473916 PLS1Q14651 629 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 TKFCQ3LXA3 575 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 P2RX5Q93086 422 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 DHTKD1Q96HY7 919 aaPredicted RBP20.08■□□□□ 0.8
VARS2-206ENST00000473916 RMDN3Q96TC7 470 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 SRRTQ9BXP5 876 aaKnown RBP20.08■□□□□ 0.8
VARS2-206ENST00000473916 SEMA6BQ9H3T3 888 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 POLD4Q9HCU8 107 aa20.08■□□□□ 0.8
VARS2-206ENST00000473916 WRAP73Q9P2S5 460 aaPredicted RBP20.08■□□□□ 0.8
VARS2-206ENST00000473916 GLTPD2A6NH11 291 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 SKILP12757 684 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 GSDMDP57764 484 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 SEMA3FQ13275 785 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 TCP11X2Q5H9J9 407 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 PCNX4Q63HM2 1172 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 PIGOQ8TEQ8 1089 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 HSD17B14Q9BPX1 270 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 BCAS3Q9H6U6 928 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 PXMP2Q9NR77 195 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 PANK4Q9NVE7 773 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 DOCK5Q9H7D0 1870 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 SCN4AP35499 1836 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 SLITRK3O94933 977 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 FDX1P10109 184 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 CCNE1P24864 410 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 IREB2P48200 963 aaKnown RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 ITGB3BPQ13352 177 aaPredicted RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 POLR3CQ9BUI4 534 aaPredicted RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 VPS16Q9H269 839 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 LIMA1Q9UHB6 759 aaKnown RBP20.07■□□□□ 0.8
VARS2-206ENST00000473916 UBIAD1Q9Y5Z9 338 aa20.07■□□□□ 0.8
VARS2-206ENST00000473916 NKRFO15226 690 aaKnown RBP eCLIP20.06■□□□□ 0.8
VARS2-206ENST00000473916 SLC26A4O43511 780 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 B3GNT9Q6UX72 402 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 LRRC27Q9C0I9 530 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 BHMT2Q9H2M3 363 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 TAF1DQ9H5J8 278 aaPredicted RBP20.06■□□□□ 0.8
VARS2-206ENST00000473916 DNM3Q9UQ16 869 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 A0A0G2JMZ2 1700 aa20.06■□□□□ 0.8
VARS2-206ENST00000473916 TBX2Q13207 712 aaPredicted RBP20.05■□□□□ 0.8
VARS2-206ENST00000473916 GADL1Q6ZQY3 521 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
VARS2-206ENST00000473916 RUSC1Q9BVN2 902 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 TEKT3Q9BXF9 490 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 SPTLC3Q9NUV7 552 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 DHX15O43143 795 aaKnown RBP20.05■□□□□ 0.8
VARS2-206ENST00000473916 SFPQP23246 707 aaKnown RBP eCLIP20.05■□□□□ 0.8
VARS2-206ENST00000473916 COPB1P53618 953 aaKnown RBP20.05■□□□□ 0.8
VARS2-206ENST00000473916 OAZ1P54368 228 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 COBLL1Q53SF7 1204 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 CEP135Q66GS9 1140 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 SPECC1LQ69YQ0 1117 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 CSGALNACT2Q8N6G5 542 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 SYT2Q8N9I0 419 aaPredicted RBP20.05■□□□□ 0.8
VARS2-206ENST00000473916 CCDC150Q8NCX0 1101 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 TEX13BQ9BXU2 312 aa20.05■□□□□ 0.8
VARS2-206ENST00000473916 AGO4Q9HCK5 861 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms