RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 CHAMP1Q96JM3 812 aa6.1□□□□□ -1.43
GPCPD1-204ENST00000473797 ZNF408Q9H9D4 720 aa6.1□□□□□ -1.43
GPCPD1-204ENST00000473797 CD248Q9HCU0 757 aa6.1□□□□□ -1.43
GPCPD1-204ENST00000473797 AGRPO00253 132 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 KRIT1O00522 736 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 DLX3O60479 287 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 CHGBP05060 677 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 COL6A1P12109 1028 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 PPP2CBP62714 309 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 PPP2CAP67775 309 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 CHST13Q8NET6 341 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.09□□□□□ -1.433e-7■■■□□ 14.8
GPCPD1-204ENST00000473797 TSC22D4Q9Y3Q8 395 aa6.09□□□□□ -1.43
GPCPD1-204ENST00000473797 GPR42O15529 346 aa6.08□□□□□ -1.44
GPCPD1-204ENST00000473797 CDSNQ15517 529 aa6.08□□□□□ -1.44
GPCPD1-204ENST00000473797 TINF2Q9BSI4 451 aa6.08□□□□□ -1.44
GPCPD1-204ENST00000473797 AKAP8O43823 692 aaKnown RBP6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 MSCO60682 206 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 NFATC3Q12968 1075 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 ICAM4Q14773 271 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 HABP4Q5JVS0 413 aaKnown RBP6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 OTOP3Q7RTS5 596 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 MCF2L2Q86YR7 1114 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 KBTBD2Q8IY47 623 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 DTX3Q8N9I9 347 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 IGDCC4Q8TDY8 1250 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 CLEC4DQ8WXI8 215 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 ZSWIM3Q96MP5 696 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 GMLQ99445 158 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 IER2Q9BTL4 223 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 FTSJ1Q9UET6 329 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 ST6GALNAC2Q9UJ37 374 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 ADAM29Q9UKF5 820 aa6.07□□□□□ -1.44
GPCPD1-204ENST00000473797 NPEPPSL1A6NEC2 478 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 KLHL18O94889 574 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 FGFR1P11362 822 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 ARID5AQ03989 594 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 PIP4K2CQ8TBX8 421 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 DCAF4Q8WV16 495 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 ZFYVE21Q9BQ24 234 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 JAM3Q9BX67 310 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 BARX1Q9HBU1 254 aaPredicted RBP6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 DLL4Q9NR61 685 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 CROTQ9UKG9 612 aa6.06□□□□□ -1.44
GPCPD1-204ENST00000473797 PATE3B3GLJ2 98 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 KLF4O43474 513 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 TCF3P15923 654 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 HSP90AA2PQ14568 343 aaPredicted RBP6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 SLFN13Q68D06 897 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 TMC5Q6UXY8 1006 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 ARHGEF18Q6ZSZ5 1173 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 CIR1Q86X95 450 aaPredicted RBP6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 CELF2-AS1Q8N7Q2 184 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 SLC43A3Q8NBI5 491 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 CDK5RAP1Q96SZ6 601 aaKnown RBP6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
GPCPD1-204ENST00000473797 SLC27A2O14975 620 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 FAHP16930 419 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 EPHA5P54756 1037 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 SMAD2Q15796 467 aaKnown RBP6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 DDR2Q16832 855 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 TRMT10BQ6PF06 316 aaKnown RBP6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 AJUBAQ96IF1 538 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 KLC2Q9H0B6 622 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 RBPJLQ9UBG7 517 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 PPARGC1AQ9UBK2 798 aaKnown RBP6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
GPCPD1-204ENST00000473797 IQCA1LA6NCM1 817 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 B4GALT4O60513 344 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 KNG1P01042 644 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 R3HDM1Q15032 1099 aaKnown RBP6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 NTRK3Q16288 839 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 KIZQ2M2Z5 673 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 PAN2Q504Q3 1202 aaKnown RBP6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 VASNQ6EMK4 673 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 Q6ZUG5 572 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 HOMEZQ8IX15 550 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 ST13P5Q8NFI4 369 aaPredicted RBP6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 NUDT10Q8NFP7 164 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 OSBP2Q969R2 916 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 NUDT11Q96G61 164 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 SEMA4AQ9H3S1 761 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 SEC61A2Q9H9S3 476 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 TESMINQ9Y4I5 508 aa6.03□□□□□ -1.44
GPCPD1-204ENST00000473797 CKMP06732 381 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 GRK2P25098 689 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 GRK3P35626 688 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 SPIRE1Q08AE8 756 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 TUSC3Q13454 348 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 STYK1Q6J9G0 422 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 CRIP3Q6Q6R5 217 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 USP53Q70EK8 1073 aa6.02□□□□□ -1.45
GPCPD1-204ENST00000473797 SPRED1Q7Z699 444 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms