RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 USO1O60763 962 aaKnown RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 PLCG2P16885 1265 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 SHMT1P34896 483 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 MAGEA1P43355 309 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 P2RX7Q99572 595 aaKnown RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ATAD5Q96QE3 1844 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ZSCAN5CA6NGD5 496 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 POTECB2RU33 542 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 hCG_1984214I3L0E3 225 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 SOCS7O14512 581 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 GYS1P13807 737 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 PRLRP16471 622 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 MYOCDQ8IZQ8 938 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 ZNF713Q8N859 430 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-214ENST00000473778 PACSIN1Q9BY11 444 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
C9orf3-214ENST00000473778 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 RBAK-RBAKDNI3L0D1 243 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 TRAF5O00463 557 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 STAT3P40763 770 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 CASP5P51878 434 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 KCTD19Q17RG1 926 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-214ENST00000473778 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf3-214ENST00000473778 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 EHD4Q9H223 541 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 BCAS3Q9H6U6 928 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 PANK4Q9NVE7 773 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-214ENST00000473778 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
C9orf3-214ENST00000473778 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
C9orf3-214ENST00000473778 C6orf229H3BNL8 230 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 TTLL1O95922 423 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.47
C9orf3-214ENST00000473778 MCM3P25205 808 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 PSEN1P49768 467 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 DNA2P51530 1060 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.47
C9orf3-214ENST00000473778 FKBP3Q00688 224 aaKnown RBP12.08□□□□□ -0.47
C9orf3-214ENST00000473778 ITIH3Q06033 890 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 TDRD12Q587J7 1177 aaKnown RBP12.08□□□□□ -0.47
C9orf3-214ENST00000473778 CACNA2D4Q7Z3S7 1137 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 ZFPM1Q8IX07 1006 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 KCTD10Q9H3F6 313 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 PCDHA12Q9UN75 941 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 HYOU1Q9Y4L1 999 aa12.08□□□□□ -0.47
C9orf3-214ENST00000473778 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 A0A087X0T9 212 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 SERPINB2P05120 415 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 FAM228BP0C875 321 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 KLRC1P26715 233 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 SCNN1DP51172 638 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 ARID5AQ03989 594 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 NFIAQ12857 509 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 ARSHQ5FYA8 562 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 TRIM59Q8IWR1 403 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 C10orf67Q8IYJ2 551 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 IQCDQ96DY2 449 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 ACBD3Q9H3P7 528 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 DNAJC18Q9H819 358 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
C9orf3-214ENST00000473778 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 SSU72P8A0A1W2PR75 194 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 ESYT3A0FGR9 886 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 MED24O75448 989 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 FTCDO95954 541 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 GLI1P08151 1106 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-214ENST00000473778 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
C9orf3-214ENST00000473778 DDR1Q08345 913 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PSMD2Q13200 908 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 TRADDQ15628 312 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 ENOX2Q16206 610 aaKnown RBP12.07□□□□□ -0.48
C9orf3-214ENST00000473778 HYIQ5T013 277 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 DPY19L2P1Q6NXN4 242 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms