RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 GPR20Q99678 358 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 ANO3Q9BYT9 981 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 MTIF3Q9H2K0 278 aaKnown RBP25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 MTMR10Q9NXD2 777 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 PFKMP08237 780 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 CLK2P49760 499 aaKnown RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 AKAP17AQ02040 695 aaKnown RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 AP3B2Q13367 1082 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 MTMR1Q13613 665 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 NTRK3Q16288 839 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 CAGE1Q8TC20 777 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 PHKBQ93100 1093 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 PGBD1Q96JS3 809 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 RNF26Q9BY78 433 aaPredicted RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 UPF3BQ9BZI7 483 aaKnown RBP25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 JADE2Q9NQC1 790 aa25.8■■□□□ 1.72
PTP4A1-203ENST00000473334 TRIP12Q14669 1992 aaPredicted RBP25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 ESYT2A0FGR8 921 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 H3BRB1 525 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 KCNA2P16389 499 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 IFNAR1P17181 557 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 RFC2P35250 354 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 CCT2P78371 535 aaKnown RBP25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 PKN1Q16512 942 aa25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 CCDC12Q8WUD4 166 aaPredicted RBP25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 TUT1Q9H6E5 874 aaKnown RBP25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 NCOA5Q9HCD5 579 aaKnown RBP25.79■■□□□ 1.72
PTP4A1-203ENST00000473334 MAFGO15525 162 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 ATP9AO75110 1047 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 IQCF3P0C7M6 154 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 SP4Q02446 784 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 VWCEQ96DN2 955 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 TMEM260Q9NX78 707 aa25.78■■□□□ 1.72
PTP4A1-203ENST00000473334 SREBF1P36956 1147 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 RBL2Q08999 1139 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 OTOP2Q7RTS6 562 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 AFAP1L1Q8TED9 768 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 DHX38Q92620 1227 aaKnown RBP25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 ZNF274Q96GC6 653 aaPredicted RBP25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 MXRA8Q9BRK3 442 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 SLC26A6Q9BXS9 759 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 ZMYND12Q9H0C1 365 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 PDRG1Q9NUG6 133 aa25.77■■□□□ 1.72
PTP4A1-203ENST00000473334 PTK7Q13308 1070 aa25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 DEFB128Q7Z7B8 93 aa25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 FAM161BQ96MY7 647 aa25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 C6orf50Q9HD87 102 aa25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 CXXC1Q9P0U4 656 aaPredicted RBP25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 ZNF215Q9UL58 517 aaPredicted RBP25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 TELO2Q9Y4R8 837 aa25.76■■□□□ 1.71
PTP4A1-203ENST00000473334 TMEM265A0A087WTH1 108 aa25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 ANAPC15P60006 121 aa25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 UTP14CQ5TAP6 766 aaKnown RBP25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 JAKMIP3Q5VZ66 844 aa25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 TRIM50Q86XT4 487 aa25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 PKD2L1Q9P0L9 805 aa25.75■■□□□ 1.71
PTP4A1-203ENST00000473334 C17orf102A2RUQ5 167 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 EIF5BO60841 1220 aaKnown RBP25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 PPFIA3O75145 1194 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 SMIM10L2AP0DMW4 78 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 SMIM10L2BP0DMW5 78 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 SELPP16109 830 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 DNAJB2P25686 324 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 GNA11P29992 359 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 ZNF200P98182 395 aaPredicted RBP25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 HIC1Q14526 733 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 CEP55Q53EZ4 464 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 MCTP2Q6DN12 878 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 CCDC148Q8NFR7 591 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 LARP6Q9BRS8 491 aaKnown RBP25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 KCNH7Q9NS40 1196 aa25.74■■□□□ 1.71
PTP4A1-203ENST00000473334 CKBP12277 381 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 ACTN1P12814 892 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 HOXC8P31273 242 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 TCF7P36402 384 aaPredicted RBP25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 ARHGAP4P98171 946 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 LRRC8DQ7L1W4 858 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 TRIM22Q8IYM9 498 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 REXO1Q8N1G1 1221 aaKnown RBP25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 CYP2W1Q8TAV3 490 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 SEPT1Q8WYJ6 367 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 GUCD1Q96NT3 240 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 TTYH1Q9H313 450 aaPredicted RBP25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 SEMA6BQ9H3T3 888 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 STXBP5LQ9Y2K9 1186 aa25.73■■□□□ 1.71
PTP4A1-203ENST00000473334 ZBBXA8MT70 800 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 GRXCR1A8MXD5 290 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 CPLX1O14810 134 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 PARNO95453 639 aaKnown RBP25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 TRIM71Q2Q1W2 868 aaKnown RBP25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 BICD2Q8TD16 824 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 SLC4A7Q9Y6M7 1214 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 GBF1Q92538 1859 aa25.72■■□□□ 1.71
PTP4A1-203ENST00000473334 NFASCO94856 1347 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 GSTTP1A0A1W2PQM5 241 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 MEIS1O00470 390 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 ARP10275 920 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 ZNF76P36508 570 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms