RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 YBX2Q9Y2T7 364 aaKnown RBP13.24□□□□□ -0.29
COL4A3-205ENST00000471862 TELO2Q9Y4R8 837 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
COL4A3-205ENST00000471862 CXCL10P02778 98 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 CKBP12277 381 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 SELPP16109 830 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 KCNA2P16389 499 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 ITGB5P18084 799 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 ZNF200P98182 395 aaPredicted RBP13.23□□□□□ -0.29
COL4A3-205ENST00000471862 LRRC8DQ7L1W4 858 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
COL4A3-205ENST00000471862 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
COL4A3-205ENST00000471862 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 UNC80Q8N2C7 3258 aa13.23□□□□□ -0.29
COL4A3-205ENST00000471862 PRUNE2Q8WUY3 3088 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 ZBBXA8MT70 800 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 H3BRB1 525 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 STXBP3O00186 592 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 ATP9AO75110 1047 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 REC8O95072 547 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
COL4A3-205ENST00000471862 ACTN1P12814 892 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 FOSL2P15408 326 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 RPS6KB1P23443 525 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
COL4A3-205ENST00000471862 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
COL4A3-205ENST00000471862 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 Q6ZUG5 572 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 BRF1Q92994 677 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 NKX2-4Q9H2Z4 354 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
COL4A3-205ENST00000471862 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 MSRAQ9UJ68 235 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
COL4A3-205ENST00000471862 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
COL4A3-205ENST00000471862 NOP56O00567 594 aaKnown RBP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 NBNO60934 754 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 SMIM10L2AP0DMW4 78 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 SMIM10L2BP0DMW5 78 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 ATP2A2P16615 1042 aaKnown RBP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 RABGGTBP53611 331 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 NAPAP54920 295 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 ADAM17P78536 824 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 MBTPS1Q14703 1052 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 MAFAQ8NHW3 353 aaPredicted RBP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 SLC9A7Q96T83 725 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL4A3-205ENST00000471862 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
COL4A3-205ENST00000471862 A0A0C4DFX4 3053 aa13.21□□□□□ -0.3
COL4A3-205ENST00000471862 MICAL3Q7RTP6 2002 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 MAFGO15525 162 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 TREHO43280 583 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 MYOGP15173 224 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 ADCY7P51828 1080 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 EVCP57679 992 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 MTMR1Q13613 665 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
COL4A3-205ENST00000471862 ZNF618Q5T7W0 954 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
COL4A3-205ENST00000471862 SIP14410 1827 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 CCDC196A0A1B0GTZ2 297 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
COL4A3-205ENST00000471862 NEFLP07196 543 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 SCG2P13521 617 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 PSMA5P28066 241 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
COL4A3-205ENST00000471862 SREBF1P36956 1147 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 WDR5P61964 334 aaKnown RBP13.19□□□□□ -0.3
COL4A3-205ENST00000471862 SP4Q02446 784 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 NTRK3Q16288 839 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 PKN1Q16512 942 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
COL4A3-205ENST00000471862 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms