RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 FAM95CA0A1B0GW59 222 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 KRT15P19012 456 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 DDIT3P35638 169 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 MYL5Q02045 173 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 PAK2Q13177 524 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 GTF2H3Q13889 308 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 TMEM206Q9H813 350 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 FAM207AQ9NSI2 230 aaPredicted RBP9.31□□□□□ -0.92
CD47-204ENST00000471694 CIAO1O76071 339 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 ADAM9Q13443 819 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 MAPK6Q16659 721 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 LONRF2Q1L5Z9 754 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 PAN2Q504Q3 1202 aaKnown RBP9.31□□□□□ -0.92
CD47-204ENST00000471694 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
CD47-204ENST00000471694 EFCC1Q9HA90 598 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 STAG3L1P0CL83 205 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 RAG1P15918 1043 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 PHBP35232 272 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 HSPA4P34932 840 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 PTGDRQ13258 359 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 TADA2BQ86TJ2 420 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 CD209Q9NNX6 404 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 ATG3Q9NT62 314 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 DONSONQ9NYP3 566 aa9.31□□□□□ -0.92
CD47-204ENST00000471694 PNMA6EA0A0J9YXQ4 647 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 NOP14P78316 857 aaKnown RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 NR1H3Q13133 447 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 GNASQ5JWF2 1037 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SH2D4BQ5SQS7 431 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SLC39A2Q9NP94 309 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 AMFRQ9UKV5 643 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CHD1O14646 1710 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 ZMYM6O95789 1325 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 PSMD14O00487 310 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SKILP12757 684 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CTTNQ14247 550 aaKnown RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 NFIXQ14938 502 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SLFN12LQ6IEE8 588 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 FRA10AC1Q70Z53 315 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 ANKRD13AQ8IZ07 590 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 KCTD6Q8NC69 237 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 ADARB2Q9NS39 739 aaKnown RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 G3BP2Q9UN86 482 aaKnown RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 OR1G1P47890 313 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 MXD4Q14582 209 aaPredicted RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 RILPQ96NA2 401 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SEPT5Q99719 369 aaPredicted RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 PNMA6FA0A0J9YX94 578 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CA4P22748 312 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 GPC3P51654 580 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CACNB1Q02641 598 aaPredicted RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
CD47-204ENST00000471694 CEP85LQ5SZL2 805 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 GRK7Q8WTQ7 553 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CDKL2Q92772 493 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
CD47-204ENST00000471694 HTATIP2Q9BUP3 242 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 NUF2Q9BZD4 464 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 RPS6KA5O75582 802 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 TRAPPC10P48553 1259 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SEPT2Q15019 361 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 CDO1Q16878 200 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 ANO4Q32M45 955 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 KCNV1Q6PIU1 500 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 DEFB128Q7Z7B8 93 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 TMCO5AQ8N6Q1 288 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 DNAJC7Q99615 494 aa9.3□□□□□ -0.92
CD47-204ENST00000471694 SYNDIG1LA6NDD5 238 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 EVI5O60447 810 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ALDH1A3P47895 512 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 ALDH7A1P49419 539 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
CD47-204ENST00000471694 WASHC5Q12768 1159 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 RSBN1LQ6PCB5 846 aaPredicted RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 CAPN12Q6ZSI9 719 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 PRR23AA6NEV1 266 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 SGK1O00141 431 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 PRPSAP2O60256 369 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 GH1P01241 217 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 PSMC2P35998 433 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 RASSF7Q02833 373 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 CPLX4Q7Z7G2 160 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 KLHL7Q8IXQ5 586 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 BANK1Q8NDB2 785 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 MYOZ2Q9NPC6 264 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 SETD1BQ9UPS6 1966 aaKnown RBP9.29□□□□□ -0.92
CD47-204ENST00000471694 IKBKBO14920 756 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 IL1RL1Q01638 556 aa9.29□□□□□ -0.92
CD47-204ENST00000471694 TYRO3Q06418 890 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms