RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 IRF5Q13568 498 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 CCDC62Q6P9F0 684 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 COPS5Q92905 334 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 EPSTI1Q96J88 318 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 CDHR1Q96JP9 859 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 TEKT3Q9BXF9 490 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 UNC45AQ9H3U1 944 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 DDX41Q9UJV9 622 aaKnown RBP21.66■■□□□ 1.06
PSPC1-203ENST00000471658 KIAA1217Q5T5P2 1943 aa21.66■■□□□ 1.06
PSPC1-203ENST00000471658 EML1O00423 815 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 CHMP2AO43633 222 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 ZNF865P0CJ78 1059 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-203ENST00000471658 HSPA1AP0DMV8 641 aaKnown RBP21.65■■□□□ 1.06
PSPC1-203ENST00000471658 HSPA1BP0DMV9 641 aaKnown RBP21.65■■□□□ 1.06
PSPC1-203ENST00000471658 UBA1P22314 1058 aaKnown RBP21.65■■□□□ 1.06
PSPC1-203ENST00000471658 ARHGEF6Q15052 776 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 TMEM266Q2M3C6 531 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 GJC2Q5T442 439 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-203ENST00000471658 NCAPH2Q6IBW4 605 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 IGSF22Q8N9C0 903 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 TRPV1Q8NER1 839 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 RAET1EQ8TD07 263 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 RIT2Q99578 217 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 GOLPH3LQ9H4A5 285 aa21.65■■□□□ 1.06
PSPC1-203ENST00000471658 RBM47A0AV96 593 aaKnown RBP21.64■■□□□ 1.05
PSPC1-203ENST00000471658 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 ADCY3O60266 1144 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 TXNP10599 105 aaKnown RBP21.64■■□□□ 1.05
PSPC1-203ENST00000471658 LONP1P36776 959 aaKnown RBP21.64■■□□□ 1.05
PSPC1-203ENST00000471658 CYFIP1Q7L576 1253 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 ZNF579Q8NAF0 562 aaKnown RBP21.64■■□□□ 1.05
PSPC1-203ENST00000471658 SCFD2Q8WU76 684 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 TBC1D22BQ9NU19 505 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 LRWD1Q9UFC0 647 aa21.64■■□□□ 1.05
PSPC1-203ENST00000471658 A0A1B0GVL5 298 aa21.63■■□□□ 1.05
PSPC1-203ENST00000471658 UBE2HP62256 183 aa21.63■■□□□ 1.05
PSPC1-203ENST00000471658 PDIA5Q14554 519 aa21.63■■□□□ 1.05
PSPC1-203ENST00000471658 CCDC144BQ3MJ40 725 aa21.63■■□□□ 1.05
PSPC1-203ENST00000471658 B3GNT9Q6UX72 402 aa21.63■■□□□ 1.05
PSPC1-203ENST00000471658 SYMPKQ92797 1274 aaKnown RBP21.63■■□□□ 1.05
PSPC1-203ENST00000471658 A0A1W2PQ27 194 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 A0A1W2PQ64 194 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 A0A1W2PQD8 194 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 ADCY6O43306 1168 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 GGPS1O95749 300 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 CCNE2O96020 404 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 TGFB3P10600 412 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 CMA1P23946 247 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 SP4Q02446 784 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 TTLL4Q14679 1199 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 MFSD14CQ5VZR4 134 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 RESP18Q5W5W9 173 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 FSIP1Q8NA03 581 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 SENP7Q9BQF6 1050 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 SDF4Q9BRK5 362 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 MMTAG2Q9BU76 263 aaKnown RBP21.62■■□□□ 1.05
PSPC1-203ENST00000471658 PANK2Q9BZ23 570 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 PTCH2Q9Y6C5 1203 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 NFASCO94856 1347 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 SMPD1P17405 629 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 LIG1P18858 919 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 LBX1P52954 281 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 CACNB2Q08289 660 aaPredicted RBP21.62■■□□□ 1.05
PSPC1-203ENST00000471658 PPP2R5CQ13362 524 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 KCNV1Q6PIU1 500 aa21.62■■□□□ 1.05
PSPC1-203ENST00000471658 GPT2Q8TD30 523 aa21.61■■□□□ 1.05
PSPC1-203ENST00000471658 DOCK5Q9H7D0 1870 aa21.61■■□□□ 1.05
PSPC1-203ENST00000471658 CASP8AP2Q9UKL3 1982 aa21.61■■□□□ 1.05
PSPC1-203ENST00000471658 A0A087X0B3 334 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 FARP2O94887 1054 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 PFKFB1P16118 471 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 NDUFA8P51970 172 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 PRMT2P55345 433 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 NEDD9Q14511 834 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 CELF3Q5SZQ8 465 aaKnown RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 IQSEC1Q6DN90 963 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 MRPS27Q92552 414 aaKnown RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 LENG1Q96BZ8 264 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 PLIN2Q99541 437 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 RAB34Q9BZG1 259 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 JPH1Q9HDC5 661 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-203ENST00000471658 SLC9A2Q9UBY0 812 aa21.6■■□□□ 1.05
PSPC1-203ENST00000471658 POTEFA5A3E0 1075 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 CYBAP13498 195 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 TNFAIP2Q03169 654 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 ZRSR1Q15695 479 aaKnown RBP21.59■■□□□ 1.05
PSPC1-203ENST00000471658 ECM1Q16610 540 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 MIER3Q7Z3K6 550 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 CABP7Q86V35 215 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 DHX37Q8IY37 1157 aaKnown RBP21.59■■□□□ 1.05
PSPC1-203ENST00000471658 PXYLP1Q8TE99 480 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 AK8Q96MA6 479 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 MLXIPQ9HAP2 919 aa21.59■■□□□ 1.05
PSPC1-203ENST00000471658 UBA7P41226 1012 aa21.58■■□□□ 1.05
PSPC1-203ENST00000471658 KARSQ15046 597 aaKnown RBP21.58■■□□□ 1.05
PSPC1-203ENST00000471658 DUSP28Q4G0W2 176 aa21.58■■□□□ 1.05
PSPC1-203ENST00000471658 PDILTQ8N807 584 aa21.58■■□□□ 1.05
PSPC1-203ENST00000471658 SNX29Q8TEQ0 813 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms