RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 NOP56O00567 594 aaKnown RBP20.16■□□□□ 0.82
VPS72-204ENST00000471423 EDIL3O43854 480 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 KPNA6O60684 536 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 CIITAP33076 1130 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 INF2Q27J81 1249 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 PIK3AP1Q6ZUJ8 805 aa20.16■□□□□ 0.82
VPS72-204ENST00000471423 DIS3L2Q8IYB7 885 aaKnown RBP20.16■□□□□ 0.82
VPS72-204ENST00000471423 GIMAP8Q8ND71 665 aaPredicted RBP20.16■□□□□ 0.82
VPS72-204ENST00000471423 AGO4Q9HCK5 861 aaKnown RBP20.16■□□□□ 0.82
VPS72-204ENST00000471423 ZNF286BP0CG31 522 aa20.15■□□□□ 0.82
VPS72-204ENST00000471423 HOXD8P13378 290 aaPredicted RBP20.15■□□□□ 0.82
VPS72-204ENST00000471423 USP11P51784 963 aa20.15■□□□□ 0.82
VPS72-204ENST00000471423 SETQ01105 290 aaPredicted RBP20.15■□□□□ 0.82
VPS72-204ENST00000471423 ITGB3BPQ13352 177 aaPredicted RBP20.15■□□□□ 0.82
VPS72-204ENST00000471423 ITGA7Q13683 1181 aa20.15■□□□□ 0.82
VPS72-204ENST00000471423 PRR16Q569H4 304 aa20.15■□□□□ 0.82
VPS72-204ENST00000471423 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
VPS72-204ENST00000471423 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
VPS72-204ENST00000471423 SCN10AQ9Y5Y9 1956 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 GRIN2DO15399 1336 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 FAM205CA6NFA0 338 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 BTBD18B2RXH4 712 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 ARVCFO00192 962 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 PQBP1O60828 265 aaKnown RBP20.14■□□□□ 0.81
VPS72-204ENST00000471423 GJB2P29033 226 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 LENG9Q96B70 501 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 UIMC1Q96RL1 719 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 GPR20Q99678 358 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 NR2E3Q9Y5X4 410 aa20.14■□□□□ 0.81
VPS72-204ENST00000471423 NFASCO94856 1347 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 TDP2O95551 362 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 TLE2Q04725 743 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 CUL4AQ13619 759 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 SAFBQ15424 915 aaKnown RBP eCLIP20.13■□□□□ 0.81
VPS72-204ENST00000471423 LETM2Q2VYF4 491 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 SLC43A3Q8NBI5 491 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 FBXO18Q8NFZ0 1043 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 PPP1R13LQ8WUF5 828 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 KAT2BQ92831 832 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 SDF4Q9BRK5 362 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 JPH1Q9HDC5 661 aaPredicted RBP20.13■□□□□ 0.81
VPS72-204ENST00000471423 SMC3Q9UQE7 1217 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 KIF3AQ9Y496 699 aa20.13■□□□□ 0.81
VPS72-204ENST00000471423 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
VPS72-204ENST00000471423 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 K7ELQ4 463 aaPredicted RBP20.12■□□□□ 0.81
VPS72-204ENST00000471423 IPO5O00410 1097 aaKnown RBP20.12■□□□□ 0.81
VPS72-204ENST00000471423 PPFIA4O75335 1185 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 F2P00734 622 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 LGALS2P05162 132 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 CDK7P50613 346 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 ANKRD33Q7Z3H0 272 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 NEK8Q86SG6 692 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 SLC9A2Q9UBY0 812 aa20.12■□□□□ 0.81
VPS72-204ENST00000471423 ZMYND8Q9ULU4 1186 aaPredicted RBP20.12■□□□□ 0.81
VPS72-204ENST00000471423 CYP3A7-CYP3A51PA0A087WV96 503 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 H0YGN5 161 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 DDX39AO00148 427 aaKnown RBP20.11■□□□□ 0.81
VPS72-204ENST00000471423 CYP3A7P24462 503 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 Q4G0T1 1027 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 MOXD1Q6UVY6 613 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 TRIM50Q86XT4 487 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 C16orf70Q9BSU1 422 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 PDLIM7Q9NR12 457 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 PCDH10Q9P2E7 1040 aa20.11■□□□□ 0.81
VPS72-204ENST00000471423 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 MSH4O15457 936 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 SYN1P17600 705 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 TCF7P36402 384 aaPredicted RBP20.1■□□□□ 0.81
VPS72-204ENST00000471423 PSEN2P49810 448 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 MFSD10Q14728 455 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 FAM47CQ5HY64 1035 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 UTP14CQ5TAP6 766 aaKnown RBP20.1■□□□□ 0.81
VPS72-204ENST00000471423 FAM126BQ8IXS8 530 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 SNX21Q969T3 373 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 MBOAT7Q96N66 472 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 TOX2Q96NM4 488 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 KATNAL1Q9BW62 490 aa20.1■□□□□ 0.81
VPS72-204ENST00000471423 PRDM5Q9NQX1 630 aaPredicted RBP20.1■□□□□ 0.81
VPS72-204ENST00000471423 DDX25Q9UHL0 483 aaKnown RBP20.1■□□□□ 0.81
VPS72-204ENST00000471423 GSTTP1A0A1W2PQM5 241 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 DHX15O43143 795 aaKnown RBP20.09■□□□□ 0.81
VPS72-204ENST00000471423 SLC37A4O43826 429 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 CCNT1O60563 726 aaKnown RBP20.09■□□□□ 0.81
VPS72-204ENST00000471423 CLTBP09497 229 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 ACTR2P61160 394 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 FAAP100Q0VG06 881 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 KIAA0753Q2KHM9 967 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 NFRKBQ6P4R8 1299 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 SEZ6LQ9BYH1 1024 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 FOXP1Q9H334 677 aaPredicted RBP20.09■□□□□ 0.81
VPS72-204ENST00000471423 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 CEP290O15078 2479 aa20.09■□□□□ 0.81
VPS72-204ENST00000471423 KIF28PB7ZC32 967 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 HAS3O00219 553 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms