RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
CCDC39-202ENST00000471307 PFDN2Q9UHV9 154 aa8.56□□□□□ -1.04
CCDC39-202ENST00000471307 BLACEA4D250 179 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 CYP7B1O75881 506 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 SOD2P04179 222 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 GNAT1P11488 350 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 SYN1P17600 705 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 GJA9P57773 515 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 HABP4Q5JVS0 413 aaKnown RBP8.55□□□□□ -1.04
CCDC39-202ENST00000471307 PRR31Q5SQ13 230 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 NT5DC1Q5TFE4 455 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 ZNF761Q86XN6 746 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-202ENST00000471307 ZDHHC14Q8IZN3 488 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
CCDC39-202ENST00000471307 B8ZZF3 427 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 NOBOXO60393 691 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 FOXD2O60548 495 aaPredicted RBP8.54□□□□□ -1.04
CCDC39-202ENST00000471307 LRG1P02750 347 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 GABREP78334 506 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 ADAM9Q13443 819 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 SNTG2Q9NY99 539 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 NCANO14594 1321 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
CCDC39-202ENST00000471307 PRRG2O14669 202 aa8.53□□□□□ -1.04
CCDC39-202ENST00000471307 WNT9AO14904 365 aa8.53□□□□□ -1.04
CCDC39-202ENST00000471307 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
CCDC39-202ENST00000471307 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
CCDC39-202ENST00000471307 DHRS4Q9BTZ2 278 aa8.53□□□□□ -1.04
CCDC39-202ENST00000471307 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
CCDC39-202ENST00000471307 SLC27A2O14975 620 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 PAK1Q13153 545 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 FOXB2Q5VYV0 432 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 SYT3Q9BQG1 590 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 LNPKQ9C0E8 428 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 DSEQ9UL01 958 aa8.52□□□□□ -1.05
CCDC39-202ENST00000471307 C6orf222P0C671 652 aaPredicted RBP8.51□□□□□ -1.05
CCDC39-202ENST00000471307 EPHA5P54756 1037 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 KIAA2012Q0VF49 1180 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 FAM124AQ86V42 546 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 JMYQ8N9B5 988 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
CCDC39-202ENST00000471307 EXOC2Q96KP1 924 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 SRPK1Q96SB4 655 aaKnown RBP8.51□□□□□ -1.05
CCDC39-202ENST00000471307 KCNJ15Q99712 375 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 ADAM7Q9H2U9 754 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 MRPS23Q9Y3D9 190 aaKnown RBP8.51□□□□□ -1.05
CCDC39-202ENST00000471307 TRAF6Q9Y4K3 522 aa8.51□□□□□ -1.05
CCDC39-202ENST00000471307 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 FAM221BA6H8Z2 402 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 FAM153BP0C7A2 387 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 ZNF28P17035 718 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 MTDHQ86UE4 582 aaKnown RBP8.5□□□□□ -1.05
CCDC39-202ENST00000471307 STK32CQ86UX6 486 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
CCDC39-202ENST00000471307 CNOT11Q9UKZ1 510 aaKnown RBP8.5□□□□□ -1.05
CCDC39-202ENST00000471307 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 ARVCFO00192 962 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 NKRFO15226 690 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC39-202ENST00000471307 COL6A2P12110 1019 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 TUSC3Q13454 348 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 KCTD1Q719H9 257 aa8.49□□□□□ -1.05
CCDC39-202ENST00000471307 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-202ENST00000471307 KISS1RQ969F8 398 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-202ENST00000471307 GSTA4O15217 222 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 EFCAB14O75071 495 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 APPP05067 770 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 FAHP16930 419 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 PAN2Q504Q3 1202 aaKnown RBP8.48□□□□□ -1.05
CCDC39-202ENST00000471307 PRAMEF18Q5VWM3 479 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 NLGN4XQ8N0W4 816 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 DNAJC7Q99615 494 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 DLL4Q9NR61 685 aa8.48□□□□□ -1.05
CCDC39-202ENST00000471307 MROH6A6NGR9 719 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 DDX3XO00571 662 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC39-202ENST00000471307 CHGBP05060 677 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 CELA3BP08861 270 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 GUCY1A3Q02108 690 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 RTP5Q14D33 572 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 BORAQ6PGQ7 559 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 TXNDC5Q8NBS9 432 aaKnown RBP8.47□□□□□ -1.05
CCDC39-202ENST00000471307 ZSWIM2Q8NEG5 633 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
CCDC39-202ENST00000471307 LCORQ96JN0 433 aaPredicted RBP8.47□□□□□ -1.05
CCDC39-202ENST00000471307 GRIN1Q05586 938 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 GPR19Q15760 415 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 MCTP2Q6DN12 878 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 PROSER1Q86XN7 944 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 LGI4Q8N135 537 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 DTX3Q8N9I9 347 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 PCDH19Q8TAB3 1148 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 PMFBP1Q8TBY8 1022 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 THAP3Q8WTV1 239 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms