RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 EDIL3O43854 480 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 ST18O60284 1047 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 CD4P01730 458 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 XBP1P17861 261 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 CIITAP33076 1130 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 NBPF20Q3BBV1 942 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 GDF15Q99988 308 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 LLPHQ9BRT6 129 aaKnown RBP17.3■□□□□ 0.36
ABCF3-208ENST00000471226 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 PRO3102Q9H379 93 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
ABCF3-208ENST00000471226 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 TRIM43BA6NCK2 446 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 FAM86B1E9PN63 330 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 F2P00734 622 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 FAM86B2P0C5J1 330 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 ARP10275 920 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 ZNF76P36508 570 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 NFRKBQ6P4R8 1299 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 TRIM43Q96BQ3 446 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-208ENST00000471226 GPR20Q99678 358 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 C16orf70Q9BSU1 422 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
ABCF3-208ENST00000471226 HAS3O00219 553 aa17.28■□□□□ 0.36
ABCF3-208ENST00000471226 TLR3O15455 904 aaKnown RBP17.28■□□□□ 0.36
ABCF3-208ENST00000471226 USP11P51784 963 aa17.28■□□□□ 0.36
ABCF3-208ENST00000471226 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-208ENST00000471226 AGO4Q9HCK5 861 aaKnown RBP17.28■□□□□ 0.36
ABCF3-208ENST00000471226 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-208ENST00000471226 TMEM39AQ9NV64 488 aa17.28■□□□□ 0.36
ABCF3-208ENST00000471226 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
ABCF3-208ENST00000471226 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
ABCF3-208ENST00000471226 NFASCO94856 1347 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 NOP56O00567 594 aaKnown RBP17.27■□□□□ 0.36
ABCF3-208ENST00000471226 B4GALT4O60513 344 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
ABCF3-208ENST00000471226 ZNF286BP0CG31 522 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-208ENST00000471226 PSEN2P49810 448 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 PLA2G4DQ86XP0 818 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
ABCF3-208ENST00000471226 COLQQ9Y215 455 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-208ENST00000471226 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
ABCF3-208ENST00000471226 GSTTP1A0A1W2PQM5 241 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 LGALS2P05162 132 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 ITGB8P26012 769 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 BMP8BP34820 402 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 ITGB3BPQ13352 177 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-208ENST00000471226 MFSD10Q14728 455 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 OXER1Q8TDS5 423 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 LENG9Q96B70 501 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 TRPV6Q9H1D0 765 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 TRIOBPQ9H2D6 2365 aa17.26■□□□□ 0.35
ABCF3-208ENST00000471226 DHX15O43143 795 aaKnown RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 MCM2P49736 904 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 MDM2Q00987 491 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 NONOQ15233 471 aaKnown RBP eCLIP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 KIAA0753Q2KHM9 967 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 PPP1R13LQ8WUF5 828 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 JPH1Q9HDC5 661 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 TRMT13Q9NUP7 481 aaKnown RBP17.25■□□□□ 0.35
ABCF3-208ENST00000471226 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
ABCF3-208ENST00000471226 RANBP2P49792 3224 aaKnown RBP17.24■□□□□ 0.35
ABCF3-208ENST00000471226 CYP3A7-CYP3A51PA0A087WV96 503 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 H3BRB1 525 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 TIMP1P01033 207 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 MMP1P03956 469 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 RAG1P15918 1043 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 CYP3A7P24462 503 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-208ENST00000471226 SP4Q02446 784 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 KRT40Q6A162 431 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 BADQ92934 168 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 LBHD1Q9BQE6 289 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-208ENST00000471226 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 TUT1Q9H6E5 874 aaKnown RBP17.24■□□□□ 0.35
ABCF3-208ENST00000471226 GTF2IRD1Q9UHL9 959 aa17.24■□□□□ 0.35
ABCF3-208ENST00000471226 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
ABCF3-208ENST00000471226 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
ABCF3-208ENST00000471226 ATG7O95352 703 aa17.23■□□□□ 0.35
ABCF3-208ENST00000471226 KRT2P35908 639 aa17.23■□□□□ 0.35
ABCF3-208ENST00000471226 CHMP4BP1P59074 171 aa17.23■□□□□ 0.35
ABCF3-208ENST00000471226 INF2Q27J81 1249 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms