RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EPHB4P54760 987 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 FPGSQ05932 587 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 MTMR1Q13613 665 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 FAM47CQ5HY64 1035 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-215ENST00000470338 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
TOP3B-215ENST00000470338 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 BICD2Q8TD16 824 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 PPP1R13LQ8WUF5 828 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 GPR20Q99678 358 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 MEIS1O00470 390 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
TOP3B-215ENST00000470338 CDKL5O76039 1030 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 CYP2C18P33260 490 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 ARHGAP4P98171 946 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 MFSD10Q14728 455 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 SHHQ15465 462 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 KIAA0753Q2KHM9 967 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 CEP55Q53EZ4 464 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 TMEM199Q8N511 208 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
TOP3B-215ENST00000470338 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-215ENST00000470338 LGALS2P05162 132 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 CYP2C9P11712 490 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 ME3Q16798 604 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 C9orf50Q5SZB4 431 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 GDF6Q6KF10 455 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-215ENST00000470338 NIPA1Q7RTP0 329 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 KIF2CQ99661 725 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 ALG1Q9BT22 464 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 UMODL1Q5DID0 1318 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 STK36Q9NRP7 1315 aa16.14■□□□□ 0.17
TOP3B-215ENST00000470338 H3BRB1 525 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 CTDNEP1O95476 244 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 ARP10275 920 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 CSF2RAP15509 400 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 NLRP5P59047 1200 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.177e-8■■□□□ 13.2
TOP3B-215ENST00000470338 PTGISQ16647 500 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 C16orf59Q7L2K0 433 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 C7orf31Q8N865 590 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
TOP3B-215ENST00000470338 NFASCO94856 1347 aa16.13■□□□□ 0.17
TOP3B-215ENST00000470338 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 WDR81Q562E7 1941 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 IGLV3-22A0A075B6J6 115 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 GSTTP1A0A1W2PQM5 241 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 FAM86B1E9PN63 330 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 M0R2N6 131 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 SLC34A2O95436 690 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 LARGE1O95461 756 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 FAM86B2P0C5J1 330 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 ZNF76P36508 570 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
TOP3B-215ENST00000470338 NPY5RQ15761 445 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 GALNT17Q6IS24 598 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 RASGRP4Q8TDF6 673 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 SEPT1Q8WYJ6 367 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 AGO4Q9HCK5 861 aaKnown RBP16.12■□□□□ 0.17
TOP3B-215ENST00000470338 PKD2L1Q9P0L9 805 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
TOP3B-215ENST00000470338 EDIL3O43854 480 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 HOXC8P31273 242 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 CIITAP33076 1130 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 TCF7P36402 384 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-215ENST00000470338 CCL23P55773 120 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 SP4Q02446 784 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 HIC1Q14526 733 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 NECAB1Q8N987 351 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 LRCH3Q96II8 777 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.176e-8■□□□□ 9.5
TOP3B-215ENST00000470338 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 NOD1Q9Y239 953 aa16.11■□□□□ 0.17
TOP3B-215ENST00000470338 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
TOP3B-215ENST00000470338 MYH9P35579 1960 aaKnown RBP16.1■□□□□ 0.17
TOP3B-215ENST00000470338 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
TOP3B-215ENST00000470338 USP11P51784 963 aa16.1■□□□□ 0.17
TOP3B-215ENST00000470338 RBL2Q08999 1139 aa16.1■□□□□ 0.17
TOP3B-215ENST00000470338 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
TOP3B-215ENST00000470338 BFSP2Q13515 415 aa16.1■□□□□ 0.17
TOP3B-215ENST00000470338 UTP14CQ5TAP6 766 aaKnown RBP16.1■□□□□ 0.17
TOP3B-215ENST00000470338 GPR153Q6NV75 609 aa16.1■□□□□ 0.17
TOP3B-215ENST00000470338 PLA2G4DQ86XP0 818 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 530.3 ms