RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 KANSL2Q9H9L4 492 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 CATSPERZQ9NTU4 200 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 DTLQ9NZJ0 730 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 ESYT3A0FGR9 886 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 NKRFO15226 690 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA2-202ENST00000470094 RASGRP1O95267 797 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
BRCA2-202ENST00000470094 TUSC3Q13454 348 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 C16orf59Q7L2K0 433 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 FAM26EQ8N5C1 309 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
BRCA2-202ENST00000470094 RNPC3Q96LT9 517 aaKnown RBP5.85□□□□□ -1.47
BRCA2-202ENST00000470094 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 KCNQ2O43526 872 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 ASMTLO95671 621 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 PYGMP11217 842 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 DNM2P50570 870 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 CAP1Q01518 475 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 GPR19Q15760 415 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 FNDC3BQ53EP0 1204 aaKnown RBP5.84□□□□□ -1.47
BRCA2-202ENST00000470094 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 KCTD1Q719H9 257 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.47
BRCA2-202ENST00000470094 SIAH1Q8IUQ4 282 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 RBM12BQ8IXT5 1001 aaKnown RBP5.84□□□□□ -1.47
BRCA2-202ENST00000470094 SYNPOQ8N3V7 929 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 TTLL11Q8NHH1 800 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 ZBTB8AQ96BR9 441 aa5.84□□□□□ -1.47
BRCA2-202ENST00000470094 HTRA3P83110 453 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 GRIN1Q05586 938 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 TCEA2Q15560 299 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 CRY1Q16526 586 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 CR1LQ2VPA4 569 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 TEPPQ6URK8 271 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 FGD2Q7Z6J4 655 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.83□□□□□ -1.48
BRCA2-202ENST00000470094 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 NLGN4XQ8N0W4 816 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 APPBP2Q92624 585 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 SCLYQ96I15 445 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 NOX5Q96PH1 765 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 GORASP1Q9BQQ3 440 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 CD244Q9BZW8 370 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 TRIM39Q9HCM9 518 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
BRCA2-202ENST00000470094 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
BRCA2-202ENST00000470094 TCRBV16S1A1N1A0A5B0 115 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 PPP1R12AO14974 1030 aaPredicted RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 SMARCA5O60264 1052 aaPredicted RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 LRG1P02750 347 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 LTFP02788 710 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 PDE6AP16499 860 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 KRT15P19012 456 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 SMAD4Q13485 552 aaKnown RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 VMACQ2NL98 169 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 PAN2Q504Q3 1202 aaKnown RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 SAPCD2Q86UD0 394 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 LINC01356Q8N9X3 169 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 KYQ8NBH2 561 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 CLEC4DQ8WXI8 215 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 C11orf84Q9BUA3 381 aaPredicted RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 CELF4Q9BZC1 486 aaKnown RBP5.82□□□□□ -1.48
BRCA2-202ENST00000470094 FANCLQ9NW38 375 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 SRPK3Q9UPE1 567 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 COQ6Q9Y2Z9 468 aa5.82□□□□□ -1.48
BRCA2-202ENST00000470094 TCRBV5S4A2TA0A5A2 114 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 B4E1Z4 1266 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 FFAR3O14843 346 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 CDC45O75419 566 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 EPHA5P54756 1037 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 ITGA1P56199 1179 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 VWA3BQ502W6 1294 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 FIGNQ5HY92 759 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 TTLL7Q6ZT98 887 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 C16orf86Q6ZW13 317 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 STK32CQ86UX6 486 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 OSTM1Q86WC4 334 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 PTRH1Q86Y79 214 aaKnown RBP5.81□□□□□ -1.48
BRCA2-202ENST00000470094 CISD2Q8N5K1 135 aaKnown RBP5.81□□□□□ -1.48
BRCA2-202ENST00000470094 TTLL6Q8N841 843 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 LINC00482Q8N8I6 264 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 SH3RF2Q8TEC5 729 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 CLUHP3Q96NS8 147 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 SYT3Q9BQG1 590 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 HSPBP1Q9NZL4 362 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 TELO2Q9Y4R8 837 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 ATP23Q9Y6H3 246 aa5.81□□□□□ -1.48
BRCA2-202ENST00000470094 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 MAN2B1O00754 1011 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 OPA1O60313 960 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 NPTXRO95502 500 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 ASLP04424 464 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 AMY2AP04746 511 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 CKMP06732 381 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 FAHP16930 419 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms