RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 SLC16A11Q8NCK7 471 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 NPLOC4Q8TAT6 608 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 DNAJC7Q99615 494 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
TPR-204ENST00000469463 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
TPR-204ENST00000469463 TSC22D4Q9Y3Q8 395 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 PCDHA2Q9Y5H9 948 aa4.78□□□□□ -1.64
TPR-204ENST00000469463 SGSM2O43147 1006 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 PABPC1P11940 636 aaKnown RBP4.77□□□□□ -1.65
TPR-204ENST00000469463 LTBRP36941 435 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 GDF5P43026 501 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 GTF2A2P52657 109 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 MAP4K2Q12851 820 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 CCDC144BQ3MJ40 725 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 MCTP2Q6DN12 878 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 TRMT2BQ96GJ1 504 aaKnown RBP4.77□□□□□ -1.65
TPR-204ENST00000469463 SORCS2Q96PQ0 1159 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 WRNIP1Q96S55 665 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 YIPF4Q9BSR8 244 aa4.77□□□□□ -1.65
TPR-204ENST00000469463 CDK11AQ9UQ88 783 aaPredicted RBP4.77□□□□□ -1.65
TPR-204ENST00000469463 COA3Q9Y2R0 106 aaPredicted RBP4.77□□□□□ -1.65
TPR-204ENST00000469463 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
TPR-204ENST00000469463 TRBV23-1A0A0A0MS06 115 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 C22orf46C9J442 243 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 DDX3XO00571 662 aaKnown RBP eCLIP4.76□□□□□ -1.65
TPR-204ENST00000469463 CYR61O00622 381 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 DLX3O60479 287 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 FSHBP01225 129 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 FGFR1P11362 822 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 C6P13671 934 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 LCP1P13796 627 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 TACR2P21452 398 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 BCL6P41182 706 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 NKX3-2P78367 333 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 USP51Q70EK9 711 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 MILR1Q7Z6M3 343 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 CCDC103Q8IW40 242 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 Q8N1Y9 231 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 TMEM169Q96HH4 297 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 PHF20Q9BVI0 1012 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 CLDND1Q9NY35 253 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 ZNF652Q9Y2D9 606 aa4.76□□□□□ -1.65
TPR-204ENST00000469463 APPP05067 770 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 SCG5P05408 212 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 FAM153BP0C7A2 387 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 ZNF28P17035 718 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 SUMO1P63165 101 aaKnown RBP4.75□□□□□ -1.65
TPR-204ENST00000469463 CYP4F3Q08477 520 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 FAM209AQ5JX71 171 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 ACBD5Q5T8D3 534 aaPredicted RBP4.75□□□□□ -1.65
TPR-204ENST00000469463 PRAMEF18Q5VWM3 479 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 CEP68Q76N32 757 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 DPH6Q7L8W6 267 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 MTDHQ86UE4 582 aaKnown RBP4.75□□□□□ -1.65
TPR-204ENST00000469463 FAM26EQ8N5C1 309 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 RCBTB1Q8NDN9 531 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 SH3RF3Q8TEJ3 882 aaPredicted RBP4.75□□□□□ -1.65
TPR-204ENST00000469463 DPF3Q92784 378 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 ZNF669Q96BR6 464 aaPredicted RBP4.75□□□□□ -1.65
TPR-204ENST00000469463 ST6GALNAC2Q9UJ37 374 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 FBXL7Q9UJT9 491 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 X6R8D5 127 aa4.75□□□□□ -1.65
TPR-204ENST00000469463 B4GALT3O60512 393 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 CYP1A1P04798 512 aaPredicted RBP4.74□□□□□ -1.65
TPR-204ENST00000469463 SLC35F1Q5T1Q4 408 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 KCNT2Q6UVM3 1135 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 LIMS2Q7Z4I7 341 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
TPR-204ENST00000469463 KREMEN2Q8NCW0 462 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 ZSWIM2Q8NEG5 633 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 OSBP2Q969R2 916 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 MKL1Q969V6 931 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 C1orf159Q96HA4 380 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 CLIC6Q96NY7 704 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 L2HGDHQ9H9P8 463 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 NDOR1Q9UHB4 597 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 TRAF6Q9Y4K3 522 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 PTCH2Q9Y6C5 1203 aa4.74□□□□□ -1.65
TPR-204ENST00000469463 NPEPPSL1A6NEC2 478 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 ADCY3O60266 1144 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 FZD7O75084 574 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 HMGA2P52926 109 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 EPHB4P54760 987 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 ADAM9Q13443 819 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 LSAMPQ13449 338 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 CR1LQ2VPA4 569 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 C2orf27AQ580R0 203 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 FOXB2Q5VYV0 432 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 DENND5AQ6IQ26 1287 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 PKN3Q6P5Z2 889 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 CRIP3Q6Q6R5 217 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 ARHGEF18Q6ZSZ5 1173 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 LRP10Q7Z4F1 713 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 NLRP10Q86W26 655 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 CIR1Q86X95 450 aaPredicted RBP4.73□□□□□ -1.65
TPR-204ENST00000469463 THAP3Q8WTV1 239 aaPredicted RBP4.73□□□□□ -1.65
TPR-204ENST00000469463 DCAF4Q8WV16 495 aa4.73□□□□□ -1.65
TPR-204ENST00000469463 TOE1Q96GM8 510 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms