RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MAGEC2Q9UBF1 373 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-205ENST00000469043 COA3Q9Y2R0 106 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-205ENST00000469043 X6R8D5 127 aa6.21□□□□□ -1.42
SCFD1-205ENST00000469043 NPEPPSL1A6NEC2 478 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 FGRP09769 529 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 IL13P35225 146 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 NPLOC4Q8TAT6 608 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 DIO2Q92813 273 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 CLIC6Q96NY7 704 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 CDK5RAP1Q96SZ6 601 aaKnown RBP6.2□□□□□ -1.42
SCFD1-205ENST00000469043 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
SCFD1-205ENST00000469043 TMEM168Q9H0V1 697 aa6.2□□□□□ -1.42
SCFD1-205ENST00000469043 CCDC194A0A1B0GVG4 234 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 HGSO14964 777 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-205ENST00000469043 DNAJC6O75061 913 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 FPR2P25090 351 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 HOXC12P31275 282 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 GDF5P43026 501 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 GJA8P48165 433 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 PLEKHG6Q3KR16 790 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 CKAP2LQ8IYA6 745 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 SH3RF3Q8TEJ3 882 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-205ENST00000469043 TOE1Q96GM8 510 aaKnown RBP6.19□□□□□ -1.42
SCFD1-205ENST00000469043 TMEM169Q96HH4 297 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 MRGPRX3Q96LB0 322 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
SCFD1-205ENST00000469043 ENPP3O14638 875 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 MEFVO15553 781 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-205ENST00000469043 B4GALT3O60512 393 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 ZNF28P17035 718 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 BCL6P41182 706 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 KCNAB2Q13303 367 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 ADAM9Q13443 819 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 CCDC140Q96MF4 163 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 SORCS2Q96PQ0 1159 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 SPC25Q9HBM1 224 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 JADE2Q9NQC1 790 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 PPP4R1LQ9P1A2 415 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 LRP2BPQ9P2M1 347 aa6.18□□□□□ -1.42
SCFD1-205ENST00000469043 SUV39H1O43463 412 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 CPP00450 1065 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 C6P13671 934 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 ATF4P18848 351 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-205ENST00000469043 PPP2CBP62714 309 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 PPP2CAP67775 309 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 ARHGEF18Q6ZSZ5 1173 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 Q8N1Y9 231 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 CHAMP1Q96JM3 812 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 WRNIP1Q96S55 665 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 DEF6Q9H4E7 631 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 DTLQ9NZJ0 730 aa6.17□□□□□ -1.42
SCFD1-205ENST00000469043 G3BP2Q9UN86 482 aaKnown RBP6.17□□□□□ -1.42
SCFD1-205ENST00000469043 H7BY64 318 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 PPP1R12AO14974 1030 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 S100BP04271 92 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 SNRPB2P08579 225 aaKnown RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 TACR2P21452 398 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 ECI1P42126 302 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 HMGA2P52926 109 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 LSAMPQ13449 338 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 USP51Q70EK9 711 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 SPRED1Q7Z699 444 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 CIR1Q86X95 450 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 SMC5Q8IY18 1101 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 RPUSD2Q8IZ73 545 aaKnown RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 FAM169BQ8N8A8 192 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 BTN2A2Q8WVV5 523 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 YTHDC1Q96MU7 727 aaKnown RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 TMEM209Q96SK2 561 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
SCFD1-205ENST00000469043 CROTQ9UKG9 612 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 PCDHB4Q9Y5E5 795 aa6.16□□□□□ -1.42
SCFD1-205ENST00000469043 SERINC3Q13530 473 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 SV2CQ496J9 727 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 NBPF6Q5VWK0 638 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 STEAP3Q658P3 488 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 MKL1Q969V6 931 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 NBPF4Q96M43 638 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 ZSWIM3Q96MP5 696 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 GABBR1Q9UBS5 961 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 FTSJ1Q9UET6 329 aa6.15□□□□□ -1.42
SCFD1-205ENST00000469043 TMEFF2Q9UIK5 374 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-205ENST00000469043 CYR61O00622 381 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
SCFD1-205ENST00000469043 MAFKO60675 156 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 DGKIO75912 1065 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 SCG5P05408 212 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 LTBRP36941 435 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 KCNJ6P48051 423 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 MLLT6P55198 1093 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-205ENST00000469043 CYP4F3Q08477 520 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 ICAM4Q14773 271 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 ACBD5Q5T8D3 534 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-205ENST00000469043 TEPPQ6URK8 271 aa6.14□□□□□ -1.43
SCFD1-205ENST00000469043 NLRP10Q86W26 655 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms