RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 TBCKQ8TEA7 893 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 CDHR1Q96JP9 859 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 GPR20Q99678 358 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 AGO4Q9HCK5 861 aaKnown RBP12.53□□□□□ -0.4
SNU13-206ENST00000469028 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
SNU13-206ENST00000469028 MAFGO15525 162 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 KPNA6O60684 536 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 F2P00734 622 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 ZNF286BP0CG31 522 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 ZNF76P36508 570 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 SP4Q02446 784 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 FAAP100Q0VG06 881 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 NR5A1Q13285 461 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 ITGB3BPQ13352 177 aaPredicted RBP12.52□□□□□ -0.41
SNU13-206ENST00000469028 DGKDQ16760 1214 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 KRT40Q6A162 431 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 LENG9Q96B70 501 aa12.52□□□□□ -0.41
SNU13-206ENST00000469028 LTBP2Q14767 1821 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 TRIM43BA6NCK2 446 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 HAS3O00219 553 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 TDP2O95551 362 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 CD4P01730 458 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 MMP1P03956 469 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 LGALS2P05162 132 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 CLTBP09497 229 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 KRT2P35908 639 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 MCM2P49736 904 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNU13-206ENST00000469028 INF2Q27J81 1249 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 KRT25Q7Z3Z0 450 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 GIMAP8Q8ND71 665 aaPredicted RBP12.51□□□□□ -0.41
SNU13-206ENST00000469028 TRIM43Q96BQ3 446 aaPredicted RBP12.51□□□□□ -0.41
SNU13-206ENST00000469028 TOX2Q96NM4 488 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 UIMC1Q96RL1 719 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
SNU13-206ENST00000469028 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
SNU13-206ENST00000469028 GSTTP1A0A1W2PQM5 241 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 B4GALT4O60513 344 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 ITGB8P26012 769 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 PSEN2P49810 448 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 USP11P51784 963 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 MFSD10Q14728 455 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 PRR16Q569H4 304 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 DIS3L2Q8IYB7 885 aaKnown RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
SNU13-206ENST00000469028 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 NFASCO94856 1347 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
SNU13-206ENST00000469028 CCDC194A0A1B0GVG4 234 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 DCDC2CA8MYV0 355 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 MSH4O15457 936 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 CCNE2O96020 404 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 TCF7P36402 384 aaPredicted RBP12.49□□□□□ -0.41
SNU13-206ENST00000469028 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 HIC1Q14526 733 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 KIAA0753Q2KHM9 967 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
SNU13-206ENST00000469028 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 SESTD1Q86VW0 696 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 PCYT2Q99447 389 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
SNU13-206ENST00000469028 SLC9A2Q9UBY0 812 aa12.49□□□□□ -0.41
SNU13-206ENST00000469028 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 DDX39AO00148 427 aaKnown RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 IPO5O00410 1097 aaKnown RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 SLC37A4O43826 429 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 CYP3A7P24462 503 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 MAGEA10P43363 369 aaPredicted RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 ACTR2P61160 394 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 PTPN11Q06124 597 aaPredicted RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 TRIM29Q14134 588 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 Q4G0T1 1027 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
SNU13-206ENST00000469028 MOXD1Q6UVY6 613 aa12.48□□□□□ -0.41
SNU13-206ENST00000469028 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms