RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 KCNJ14Q9UNX9 436 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 GRIN2DO15399 1336 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 ADAMTS3O15072 1205 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 JAK2O60674 1132 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 NFASCO94856 1347 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 SUPT20HL2P0C7V6 817 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 PSMC6P62333 389 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 FAAP100Q0VG06 881 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 NPY5RQ15761 445 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 PLA2G4DQ86XP0 818 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 GPR20Q99678 358 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 PDLIM7Q9NR12 457 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 TMEM39AQ9NV64 488 aa16.83■□□□□ 0.28
TMEM39A-205ENST00000468676 DOCK5Q9H7D0 1870 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 CCDC194A0A1B0GVG4 234 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 FAM86B1E9PN63 330 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 KIAA0355O15063 1070 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 SORBS3O60504 671 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 ATP9AO75110 1047 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 F2P00734 622 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 CD4P01730 458 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 FAM86B2P0C5J1 330 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 SYN1P17600 705 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 SESTD1Q86VW0 696 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 TBCKQ8TEA7 893 aa16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 LBHD1Q9BQE6 289 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 AGO4Q9HCK5 861 aaKnown RBP16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 PRDM5Q9NQX1 630 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-205ENST00000468676 IGLV3-22A0A075B6J6 115 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 ARP10275 920 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 PSEN2P49810 448 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 SEPT1Q8WYJ6 367 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 KAT2BQ92831 832 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 JPH1Q9HDC5 661 aaPredicted RBP16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 TBC1D22BQ9NU19 505 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 SLC9A2Q9UBY0 812 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 ZNF215Q9UL58 517 aaPredicted RBP16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 KIF3AQ9Y496 699 aa16.81■□□□□ 0.28
TMEM39A-205ENST00000468676 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 H3BRB1 525 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 HAS3O00219 553 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 IPO5O00410 1097 aaKnown RBP16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 ZNF286BP0CG31 522 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 RAG1P15918 1043 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 BMP8BP34820 402 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 KRT2P35908 639 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 MFSD10Q14728 455 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 SAFBQ15424 915 aaKnown RBP eCLIP16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 KIAA0753Q2KHM9 967 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 PRR16Q569H4 304 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 FAM47CQ5HY64 1035 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 MOXD1Q6UVY6 613 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 TRIM43Q96BQ3 446 aaPredicted RBP16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 GDF15Q99988 308 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 ZNF577Q9BSK1 485 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 C16orf70Q9BSU1 422 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 TUT1Q9H6E5 874 aaKnown RBP16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 PKD2L1Q9P0L9 805 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 TBX21Q9UL17 535 aa16.8■□□□□ 0.28
TMEM39A-205ENST00000468676 CYP3A7-CYP3A51PA0A087WV96 503 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 MMP1P03956 469 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 LGALS2P05162 132 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 CYP3A7P24462 503 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 MAGEA10P43363 369 aaPredicted RBP16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 CHMP4BP1P59074 171 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 SP4Q02446 784 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 C8orf76Q96K31 380 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 TRPV6Q9H1D0 765 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 TCEAL9Q9UHQ7 104 aa16.79■□□□□ 0.28
TMEM39A-205ENST00000468676 B4GALT4O60513 344 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 DTNBO60941 627 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 TIMP1P01033 207 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 TCF7P36402 384 aaPredicted RBP16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 Q4G0T1 1027 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 KRT40Q6A162 431 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 SMARCAD1Q9H4L7 1026 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 KAT6AQ92794 2004 aa16.78■□□□□ 0.28
TMEM39A-205ENST00000468676 A0A1W2PPC1 479 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 GSTTP1A0A1W2PQM5 241 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 INF2Q27J81 1249 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
TMEM39A-205ENST00000468676 NEK8Q86SG6 692 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms