RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ARP10275 920 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 TRIM29Q14134 588 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 PLA2G4DQ86XP0 818 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 TBCKQ8TEA7 893 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 KAT2BQ92831 832 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 GPR20Q99678 358 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 AGO4Q9HCK5 861 aaKnown RBP22.78■■□□□ 1.24
NPHP4-206ENST00000468253 BRMS1Q9HCU9 246 aa22.78■■□□□ 1.24
NPHP4-206ENST00000468253 KIAA1217Q5T5P2 1943 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 NOP56O00567 594 aaKnown RBP22.77■■□□□ 1.24
NPHP4-206ENST00000468253 SETQ01105 290 aaPredicted RBP22.77■■□□□ 1.24
NPHP4-206ENST00000468253 NONOQ15233 471 aaKnown RBP eCLIP22.77■■□□□ 1.24
NPHP4-206ENST00000468253 NBPF20Q3BBV1 942 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 MOXD1Q6UVY6 613 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 SEPT1Q8WYJ6 367 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 KATNAL1Q9BW62 490 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 GJB4Q9NTQ9 266 aa22.77■■□□□ 1.24
NPHP4-206ENST00000468253 HAS3O00219 553 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 TLR3O15455 904 aaKnown RBP22.76■■□□□ 1.23
NPHP4-206ENST00000468253 PQBP1O60828 265 aaKnown RBP22.76■■□□□ 1.23
NPHP4-206ENST00000468253 DTNBO60941 627 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 CD2BP2O95400 341 aaKnown RBP22.76■■□□□ 1.23
NPHP4-206ENST00000468253 F2P00734 622 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 CD4P01730 458 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 MMP1P03956 469 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 PSMC6P62333 389 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 FAAP100Q0VG06 881 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 SESTD1Q86VW0 696 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 FAM126BQ8IXS8 530 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 SDF4Q9BRK5 362 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 C16orf70Q9BSU1 422 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 TBC1D22BQ9NU19 505 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 PRKAG2Q9UGJ0 569 aa22.76■■□□□ 1.23
NPHP4-206ENST00000468253 CCDC194A0A1B0GVG4 234 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 KIAA0355O15063 1070 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 CLTBP09497 229 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 SUPT20HL2P0C7V6 817 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 KRT2P35908 639 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 Q4G0T1 1027 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 KRT40Q6A162 431 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 FAM184AQ8NB25 1140 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 MBOAT7Q96N66 472 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 KIF3AQ9Y496 699 aa22.75■■□□□ 1.23
NPHP4-206ENST00000468253 IPO5O00410 1097 aaKnown RBP22.74■■□□□ 1.23
NPHP4-206ENST00000468253 SAFBQ15424 915 aaKnown RBP eCLIP22.74■■□□□ 1.23
NPHP4-206ENST00000468253 FBXO18Q8NFZ0 1043 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 OXER1Q8TDS5 423 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 LENG9Q96B70 501 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 C8orf76Q96K31 380 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 NAP1L4Q99733 375 aaKnown RBP22.74■■□□□ 1.23
NPHP4-206ENST00000468253 JPH1Q9HDC5 661 aaPredicted RBP22.74■■□□□ 1.23
NPHP4-206ENST00000468253 PDLIM7Q9NR12 457 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 TMEM39AQ9NV64 488 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 SLC9A2Q9UBY0 812 aa22.74■■□□□ 1.23
NPHP4-206ENST00000468253 GSTTP1A0A1W2PQM5 241 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 H3BRB1 525 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 DHX15O43143 795 aaKnown RBP22.73■■□□□ 1.23
NPHP4-206ENST00000468253 SORBS3O60504 671 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 ATG7O95352 703 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 PSEN2P49810 448 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 ITGB3BPQ13352 177 aaPredicted RBP22.73■■□□□ 1.23
NPHP4-206ENST00000468253 PRR16Q569H4 304 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 TNFRSF25Q93038 417 aa22.73■■□□□ 1.23
NPHP4-206ENST00000468253 TUT1Q9H6E5 874 aaKnown RBP22.73■■□□□ 1.23
NPHP4-206ENST00000468253 ZMYND8Q9ULU4 1186 aaPredicted RBP22.73■■□□□ 1.23
NPHP4-206ENST00000468253 TRIM43BA6NCK2 446 aa22.72■■□□□ 1.23
NPHP4-206ENST00000468253 LGALS2P05162 132 aa22.72■■□□□ 1.23
NPHP4-206ENST00000468253 GCFC2P16383 781 aaKnown RBP22.72■■□□□ 1.23
NPHP4-206ENST00000468253 MFSD10Q14728 455 aa22.72■■□□□ 1.23
NPHP4-206ENST00000468253 DIS3L2Q8IYB7 885 aaKnown RBP22.72■■□□□ 1.23
NPHP4-206ENST00000468253 TRIM43Q96BQ3 446 aaPredicted RBP22.72■■□□□ 1.23
NPHP4-206ENST00000468253 ZNF577Q9BSK1 485 aa22.72■■□□□ 1.23
NPHP4-206ENST00000468253 TBX21Q9UL17 535 aa22.72■■□□□ 1.23
NPHP4-206ENST00000468253 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.72■■□□□ 1.23
NPHP4-206ENST00000468253 BTBD18B2RXH4 712 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 BMP8BP34820 402 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 INF2Q27J81 1249 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 KIAA0753Q2KHM9 967 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 NEK8Q86SG6 692 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 RIT2Q99578 217 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 GDF15Q99988 308 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 PKD2L1Q9P0L9 805 aa22.71■■□□□ 1.23
NPHP4-206ENST00000468253 LGR5O75473 907 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 ZNF286BP0CG31 522 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 SYN1P17600 705 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 TCF7P36402 384 aaPredicted RBP22.7■■□□□ 1.22
NPHP4-206ENST00000468253 NR5A1Q13285 461 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 CUL4AQ13619 759 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 PIK3AP1Q6ZUJ8 805 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 SH3RF1Q7Z6J0 888 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 C7orf31Q8N865 590 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 LBHD1Q9BQE6 289 aaPredicted RBP22.7■■□□□ 1.22
NPHP4-206ENST00000468253 TRPV6Q9H1D0 765 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 FOXP1Q9H334 677 aaPredicted RBP22.7■■□□□ 1.22
NPHP4-206ENST00000468253 SMARCAD1Q9H4L7 1026 aa22.7■■□□□ 1.22
NPHP4-206ENST00000468253 ZNF215Q9UL58 517 aaPredicted RBP22.7■■□□□ 1.22
NPHP4-206ENST00000468253 MSH4O15457 936 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 B4GALT4O60513 344 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 TIMP1P01033 207 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms