RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DHX37Q8IY37 1157 aaKnown RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 HAS1Q92839 578 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 PAK6Q9NQU5 681 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 HTTP42858 3142 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 ADCY6O43306 1168 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 FARP2O94887 1054 aaPredicted RBP17.18■□□□□ 0.34
SNIP1-202ENST00000468040 PRPHP41219 470 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
SNIP1-202ENST00000468040 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
SNIP1-202ENST00000468040 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 OR6J1Q8NGC5 347 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 TEKT3Q9BXF9 490 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 AP5M1Q9H0R1 490 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 SPC25Q9HBM1 224 aa17.18■□□□□ 0.34
SNIP1-202ENST00000468040 MORC2Q9Y6X9 1032 aaPredicted RBP17.18■□□□□ 0.34
SNIP1-202ENST00000468040 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 PSMD10O75832 226 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 YEATS4O95619 227 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 TXKP42681 527 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 KRT76Q01546 638 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 MTFR1Q15390 333 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 TMEM63BQ5T3F8 832 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 ARL6IP4Q66PJ3 421 aaKnown RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 CYFIP1Q7L576 1253 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 COPS5Q92905 334 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 XPNPEP3Q9NQH7 507 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
SNIP1-202ENST00000468040 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
SNIP1-202ENST00000468040 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 CPT1AP50416 773 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 NKX3-2P78367 333 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 STK38Q15208 465 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 PTPAQ15257 358 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 LHX8Q68G74 356 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 ZNF746Q6NUN9 644 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 DTHD1Q6ZMT9 781 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 PPTC7Q8NI37 304 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 LENG1Q96BZ8 264 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 SPATA33Q96N06 139 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 RAB34Q9BZG1 259 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
SNIP1-202ENST00000468040 SYNRGQ9UMZ2 1314 aa17.16■□□□□ 0.34
SNIP1-202ENST00000468040 DDX39AO00148 427 aaKnown RBP17.15■□□□□ 0.34
SNIP1-202ENST00000468040 SFNP31947 248 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 GJA9P57773 515 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 PPP2R5CQ13362 524 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 SMAP1Q8IYB5 467 aaPredicted RBP17.15■□□□□ 0.34
SNIP1-202ENST00000468040 LINC00301Q8NCQ3 95 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 KCNG4Q8TDN1 519 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 GJA10Q969M2 543 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 DEFB118Q96PH6 123 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 SCAND2PQ9GZW5 306 aaPredicted RBP17.15■□□□□ 0.34
SNIP1-202ENST00000468040 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 ELP1O95163 1332 aa17.15■□□□□ 0.34
SNIP1-202ENST00000468040 A6NJR5 290 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 WDR64B1ANS9 1081 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 SORBS3O60504 671 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 ADAMTS4O75173 837 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 PGK1P00558 417 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 GJB1P08034 283 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
SNIP1-202ENST00000468040 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNIP1-202ENST00000468040 JAK3P52333 1124 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 ACTR2P61160 394 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 SP4Q02446 784 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 FSCN1Q16658 493 aaKnown RBP17.14■□□□□ 0.33
SNIP1-202ENST00000468040 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 B3GNT9Q6UX72 402 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 RNF180Q86T96 592 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 SEPT1Q8WYJ6 367 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 GPR20Q99678 358 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
SNIP1-202ENST00000468040 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 SPTLC2O15270 562 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 CHMP2AO43633 222 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 ZEB2O60315 1214 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms