RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 CEP131Q9UPN4 1083 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 LAD1O00515 517 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 PTGDRQ13258 359 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 FOXD4L6Q3SYB3 417 aaPredicted RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 GJC2Q5T442 439 aaPredicted RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 ANO1Q5XXA6 986 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 METTL7BQ6UX53 244 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 FOXD4L3Q6VB84 417 aaPredicted RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 TLK2Q86UE8 772 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 HAS1Q92839 578 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 LENG1Q96BZ8 264 aaPredicted RBP19.31■□□□□ 0.68
VARS2-204ENST00000467717 MTMR9Q96QG7 549 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 UIMC1Q96RL1 719 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 USP28Q96RU2 1077 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 TMEM60Q9H2L4 133 aa19.31■□□□□ 0.68
VARS2-204ENST00000467717 DHX15O43143 795 aaKnown RBP19.3■□□□□ 0.68
VARS2-204ENST00000467717 DYNC1LI2O43237 492 aaPredicted RBP19.3■□□□□ 0.68
VARS2-204ENST00000467717 FARP2O94887 1054 aaPredicted RBP19.3■□□□□ 0.68
VARS2-204ENST00000467717 OR52Z1P0C646 297 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 ARHGAP1Q07960 439 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 LHX8Q68G74 356 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 CYFIP1Q7L576 1253 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 C4orf32Q8N8J7 132 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 OR6J1Q8NGC5 347 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 AP5M1Q9H0R1 490 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 SPC25Q9HBM1 224 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 JPH1Q9HDC5 661 aaPredicted RBP19.3■□□□□ 0.68
VARS2-204ENST00000467717 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
VARS2-204ENST00000467717 GAS7O60861 476 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 PSMD10O75832 226 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 PTGS1P23219 599 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 GJA9P57773 515 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 ATP2C1P98194 919 aaPredicted RBP19.29■□□□□ 0.68
VARS2-204ENST00000467717 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
VARS2-204ENST00000467717 GJA10Q969M2 543 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 SPATA33Q96N06 139 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 DEFB118Q96PH6 123 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 TEKT3Q9BXF9 490 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 FTOQ9C0B1 505 aaKnown RBP eCLIP19.29■□□□□ 0.68
VARS2-204ENST00000467717 BCAS3Q9H6U6 928 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 XPNPEP3Q9NQH7 507 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 TCEAL9Q9UHQ7 104 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 CFAP45Q9UL16 551 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 BRCA2P51587 3418 aa19.29■□□□□ 0.68
VARS2-204ENST00000467717 SORBS3O60504 671 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 GJB1P08034 283 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 TXKP42681 527 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
VARS2-204ENST00000467717 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
VARS2-204ENST00000467717 UPF3AQ9H1J1 476 aaKnown RBP19.28■□□□□ 0.68
VARS2-204ENST00000467717 TFIP11Q9UBB9 837 aaKnown RBP19.28■□□□□ 0.68
VARS2-204ENST00000467717 SLC9A2Q9UBY0 812 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 PCDHA12Q9UN75 941 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 LRRC37A2A6NM11 1700 aa19.28■□□□□ 0.68
VARS2-204ENST00000467717 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 DDX39AO00148 427 aaKnown RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 NOP56O00567 594 aaKnown RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 PRPHP41219 470 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 NKX3-2P78367 333 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 KRT76Q01546 638 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 PTPAQ15257 358 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 BRDTQ58F21 947 aaPredicted RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 ARL6IP4Q66PJ3 421 aaKnown RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 ZNF746Q6NUN9 644 aaPredicted RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 PPTC7Q8NI37 304 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 AFG1LQ8WV93 481 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 TMEM106CQ9BVX2 250 aa19.27■□□□□ 0.68
VARS2-204ENST00000467717 TTC12Q9H892 705 aaPredicted RBP19.27■□□□□ 0.68
VARS2-204ENST00000467717 MCM3APO60318 1980 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 MYH7BA7E2Y1 1941 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 A6NJR5 290 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 PGK1P00558 417 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 C6orf222P0C671 652 aaPredicted RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 CPT1AP50416 773 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 KRT85P78386 507 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 SP4Q02446 784 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 PPP2R5CQ13362 524 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 SLC39A14Q15043 492 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 STK38Q15208 465 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 FSCN1Q16658 493 aaKnown RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 HSDL1Q3SXM5 330 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 HABP4Q5JVS0 413 aaKnown RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 B3GNT9Q6UX72 402 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 DTHD1Q6ZMT9 781 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 RNF180Q86T96 592 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 SMAP1Q8IYB5 467 aaPredicted RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 U2AF1L4Q8WU68 220 aaKnown RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 VAV3Q9UKW4 847 aa19.26■□□□□ 0.67
VARS2-204ENST00000467717 MORC2Q9Y6X9 1032 aaPredicted RBP19.26■□□□□ 0.67
VARS2-204ENST00000467717 CTAGE5O15320 804 aa19.25■□□□□ 0.67
VARS2-204ENST00000467717 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
VARS2-204ENST00000467717 SGPL1O95470 568 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms