RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 MRPL38Q96DV4 380 aaKnown RBP18.21■□□□□ 0.51
TSSC4-208ENST00000467308 SAMD11Q96NU1 681 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 DSCC1Q9BVC3 393 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 KRT23Q9C075 422 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
TSSC4-208ENST00000467308 COL4A6Q14031 1691 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 FAM86C2PA6NEL3 165 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 ZBTB5O15062 677 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 CAND2O75155 1236 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 SEC24BO95487 1268 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 UBA1P22314 1058 aaKnown RBP18.2■□□□□ 0.5
TSSC4-208ENST00000467308 PGM5Q15124 567 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 PUS10Q3MIT2 529 aaKnown RBP18.2■□□□□ 0.5
TSSC4-208ENST00000467308 CWC27Q6UX04 472 aaKnown RBP18.2■□□□□ 0.5
TSSC4-208ENST00000467308 STAG2Q8N3U4 1231 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 PCDHA1Q9Y5I3 950 aa18.2■□□□□ 0.5
TSSC4-208ENST00000467308 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 H3BRB1 525 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
TSSC4-208ENST00000467308 SP2Q02086 613 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 TRAF1Q13077 416 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 EPC2Q52LR7 807 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 IFIT1BQ5T764 474 aaKnown RBP18.19■□□□□ 0.5
TSSC4-208ENST00000467308 PTCRAQ6ISU1 281 aaPredicted RBP18.19■□□□□ 0.5
TSSC4-208ENST00000467308 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
TSSC4-208ENST00000467308 TUT1Q9H6E5 874 aaKnown RBP18.19■□□□□ 0.5
TSSC4-208ENST00000467308 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
TSSC4-208ENST00000467308 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 CCND2P30279 289 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
TSSC4-208ENST00000467308 IL31RAQ8NI17 732 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 NEK9Q8TD19 979 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 SEPT8Q92599 483 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 TOP1MTQ969P6 601 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 MLXIPQ9HAP2 919 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 MAD2L2Q9UI95 211 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 NLRC5Q86WI3 1866 aa18.18■□□□□ 0.5
TSSC4-208ENST00000467308 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
TSSC4-208ENST00000467308 H3BNC9 293 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 SMIM10L2AP0DMW4 78 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 SMIM10L2BP0DMW5 78 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 ALADP13716 330 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 IL9P15248 144 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 SEC23AQ15436 765 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 YME1L1Q96TA2 773 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 IL25Q9H293 177 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 RALGAPA2Q2PPJ7 1873 aa18.17■□□□□ 0.5
TSSC4-208ENST00000467308 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
TSSC4-208ENST00000467308 GCOM1H8Y6P7 765 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-208ENST00000467308 SORBS3O60504 671 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 LGALS2P05162 132 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 POLR2MP0CAP2 368 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 SSTR3P32745 418 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-208ENST00000467308 COL19A1Q14993 1142 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
TSSC4-208ENST00000467308 MYO7AQ13402 2215 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
TSSC4-208ENST00000467308 TREHO43280 583 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 STAM2O75886 525 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 GNAT1P11488 350 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 METTL7BQ6UX53 244 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 TMEM192Q8IY95 271 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 APBB2Q92870 758 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.5
TSSC4-208ENST00000467308 PABPC5Q96DU9 382 aaKnown RBP18.15■□□□□ 0.5
TSSC4-208ENST00000467308 RIOX1Q9H6W3 641 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 FAM50BQ9Y247 325 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 KAT6AQ92794 2004 aa18.15■□□□□ 0.5
TSSC4-208ENST00000467308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.14■□□□□ 0.49
TSSC4-208ENST00000467308 RBAK-RBAKDNI3L0D1 243 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 ICAM3P32942 547 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 GPM6BQ13491 265 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 NEDD9Q14511 834 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 TBC1D32Q96NH3 1257 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 INPP4AQ96PE3 977 aaPredicted RBP18.14■□□□□ 0.49
TSSC4-208ENST00000467308 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
TSSC4-208ENST00000467308 NSUN3Q9H649 340 aaKnown RBP18.14■□□□□ 0.49
TSSC4-208ENST00000467308 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
TSSC4-208ENST00000467308 H3BQ06 376 aaPredicted RBP18.13■□□□□ 0.49
TSSC4-208ENST00000467308 CTSHP09668 335 aa18.13■□□□□ 0.49
TSSC4-208ENST00000467308 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
TSSC4-208ENST00000467308 GRM4Q14833 912 aa18.13■□□□□ 0.49
TSSC4-208ENST00000467308 TCEAL5Q5H9L2 206 aa18.13■□□□□ 0.49
TSSC4-208ENST00000467308 IFIH1Q9BYX4 1025 aaKnown RBP18.13■□□□□ 0.49
TSSC4-208ENST00000467308 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
TSSC4-208ENST00000467308 PRKAG3Q9UGI9 489 aa18.13■□□□□ 0.49
TSSC4-208ENST00000467308 DOCK5Q9H7D0 1870 aa18.12■□□□□ 0.49
TSSC4-208ENST00000467308 PNMA6FA0A0J9YX94 578 aa18.12■□□□□ 0.49
TSSC4-208ENST00000467308 SPATA31C2B4DYI2 1134 aa18.12■□□□□ 0.49
TSSC4-208ENST00000467308 NCK2O43639 380 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms