RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 RBPJLQ9UBG7 517 aa6.47□□□□□ -1.37
SMC4-207ENST00000467263 GPR42O15529 346 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 SSRP1Q08945 709 aaKnown RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 YOD1Q5VVQ6 348 aaPredicted RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 BORAQ6PGQ7 559 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 GLB1LQ6UWU2 654 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 RIOX2Q8IUF8 465 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 LRRC47Q8N1G4 583 aaKnown RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 CHST13Q8NET6 341 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 DIO2Q92813 273 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 TRMT2BQ96GJ1 504 aaKnown RBP6.46□□□□□ -1.38
SMC4-207ENST00000467263 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 SPATA9Q9BWV2 254 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 PCDH18Q9HCL0 1135 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 CD248Q9HCU0 757 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 SNTG2Q9NY99 539 aa6.46□□□□□ -1.38
SMC4-207ENST00000467263 PRODHO43272 600 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 LAMTOR5O43504 91 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 DLX3O60479 287 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 C6P13671 934 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 IL13P35225 146 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 SLC35F1Q5T1Q4 408 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 MROH9Q5TGP6 573 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 PRAMEF18Q5VWM3 479 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
SMC4-207ENST00000467263 KCTD13Q8WZ19 329 aa6.45□□□□□ -1.38
SMC4-207ENST00000467263 YTHDC1Q96MU7 727 aaKnown RBP6.45□□□□□ -1.38
SMC4-207ENST00000467263 TCRBV5S2A0A599 114 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 SLPIP03973 132 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
SMC4-207ENST00000467263 NKX3-2P78367 333 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 IFRD2Q12894 506 aaPredicted RBP6.44□□□□□ -1.38
SMC4-207ENST00000467263 E4F1Q66K89 784 aaPredicted RBP6.44□□□□□ -1.38
SMC4-207ENST00000467263 IQCEQ6IPM2 695 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 FAM124AQ86V42 546 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 IGDCC4Q8TDY8 1250 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SMC4-207ENST00000467263 KDM2BQ8NHM5 1336 aa6.44□□□□□ -1.38
SMC4-207ENST00000467263 TRAV20A0A0B4J274 112 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 LRG1P02750 347 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 CYP1A1P04798 512 aaPredicted RBP6.43□□□□□ -1.38
SMC4-207ENST00000467263 MAP4K2Q12851 820 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 KCNAB2Q13303 367 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
SMC4-207ENST00000467263 PHF19Q5T6S3 580 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 ACBD5Q5T8D3 534 aaPredicted RBP6.43□□□□□ -1.38
SMC4-207ENST00000467263 TEPPQ6URK8 271 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 NSMFQ6X4W1 530 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 USP53Q70EK8 1073 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 UBXN4Q92575 508 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 OSBP2Q969R2 916 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 TMEM169Q96HH4 297 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 DNAJC7Q99615 494 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 OSBPL2Q9H1P3 480 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 CROTQ9UKG9 612 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
SMC4-207ENST00000467263 BLACEA4D250 179 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 ADCY3O60266 1144 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 TADA3O75528 432 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 FGFR1P11362 822 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 LTBRP36941 435 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 TMC5Q6UXY8 1006 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 DNERQ8NFT8 737 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 SORCS2Q96PQ0 1159 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 YIPF4Q9BSR8 244 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 DTLQ9NZJ0 730 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 ZNF652Q9Y2D9 606 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 TSC22D4Q9Y3Q8 395 aa6.42□□□□□ -1.38
SMC4-207ENST00000467263 HGSO14964 777 aaPredicted RBP6.41□□□□□ -1.38
SMC4-207ENST00000467263 SUV39H1O43463 412 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 MYO1BO43795 1136 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 FAM153BP0C7A2 387 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 TACR2P21452 398 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 FOXB2Q5VYV0 432 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 STEAP3Q658P3 488 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 ZNF585AQ6P3V2 769 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 PKN3Q6P5Z2 889 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 LRP10Q7Z4F1 713 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 ZFPM1Q8IX07 1006 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 PALM2Q8IXS6 379 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 ZBTB38Q8NAP3 1195 aaPredicted RBP6.41□□□□□ -1.38
SMC4-207ENST00000467263 MKL1Q969V6 931 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 TOE1Q96GM8 510 aaKnown RBP6.41□□□□□ -1.38
SMC4-207ENST00000467263 CDC6Q99741 560 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 KLC2Q9H0B6 622 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 SRRDQ9UH36 339 aa6.41□□□□□ -1.38
SMC4-207ENST00000467263 NPEPPSL1A6NEC2 478 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 COL6A1P12109 1028 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 NTRK3Q16288 839 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 FAM209AQ5JX71 171 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 KCNT2Q6UVM3 1135 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms