RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ZNF568Q3ZCX4 644 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 TNNI3KQ59H18 835 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 VASNQ6EMK4 673 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 TMC5Q6UXY8 1006 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 RALYLQ86SE5 291 aaKnown RBP3.81□□□□□ -1.8
CCDC93-205ENST00000466171 ZNF227Q86WZ6 799 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 CCDC103Q8IW40 242 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 IFNL2Q8IZJ0 200 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 Q8N1X5 172 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 FAM169BQ8N8A8 192 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 ZCCHC14Q8WYQ9 949 aaKnown RBP3.81□□□□□ -1.8
CCDC93-205ENST00000466171 DLL4Q9NR61 685 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 ACTR10Q9NZ32 417 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 TMEFF2Q9UIK5 374 aaPredicted RBP3.81□□□□□ -1.8
CCDC93-205ENST00000466171 INPP5FQ9Y2H2 1132 aa3.81□□□□□ -1.8
CCDC93-205ENST00000466171 ZBTB7CA1YPR0 619 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 PATE3B3GLJ2 98 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 SLPIP03973 132 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 CHGBP05060 677 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 CYP4F3Q08477 520 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 LARP1BQ659C4 914 aaKnown RBP3.8□□□□□ -1.8
CCDC93-205ENST00000466171 C6orf15Q6UXA7 325 aaPredicted RBP3.8□□□□□ -1.8
CCDC93-205ENST00000466171 VPS37DQ86XT2 251 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 FAM178BQ8IXR5 827 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 KREMEN2Q8NCW0 462 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCDC93-205ENST00000466171 LGR4Q9BXB1 951 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 ZNF341Q9BYN7 854 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 SEC61A2Q9H9S3 476 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 HSPBP1Q9NZL4 362 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 ADAM29Q9UKF5 820 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 HS3ST3A1Q9Y663 406 aa3.8□□□□□ -1.8
CCDC93-205ENST00000466171 SUSD5O60279 629 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 DDAH1O94760 285 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 SSBP05455 408 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC93-205ENST00000466171 GFRA1P56159 465 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 PRKD1Q15139 912 aaPredicted RBP3.79□□□□□ -1.8
CCDC93-205ENST00000466171 SMAD2Q15796 467 aaKnown RBP3.79□□□□□ -1.8
CCDC93-205ENST00000466171 PRSS53Q2L4Q9 553 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 SPDYAQ5MJ70 313 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 GIMAP8Q8ND71 665 aaPredicted RBP3.79□□□□□ -1.8
CCDC93-205ENST00000466171 TTLL11Q8NHH1 800 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 TGIF2Q9GZN2 237 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 PCED1AQ9H1Q7 454 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 CCSER2Q9H7U1 834 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 SLC6A20Q9NP91 592 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 ASH2LQ9UBL3 628 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 FBXL7Q9UJT9 491 aa3.79□□□□□ -1.8
CCDC93-205ENST00000466171 TBX1O43435 398 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 MFAP1P55081 439 aaKnown RBP3.78□□□□□ -1.8
CCDC93-205ENST00000466171 TGFB2P61812 414 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 HDLBPQ00341 1268 aaKnown RBP3.78□□□□□ -1.8
CCDC93-205ENST00000466171 FXNQ16595 210 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 Q6ZUG5 572 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 TMEM145Q8NBT3 493 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 Q8TCH9 128 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 KCTD13Q8WZ19 329 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 LMF1Q96S06 567 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 PTPN18Q99952 460 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 EPN3Q9H201 632 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 CAPN10Q9HC96 672 aa3.78□□□□□ -1.8
CCDC93-205ENST00000466171 ARNTLO00327 626 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 SMAD7O15105 426 aaKnown RBP3.77□□□□□ -1.81
CCDC93-205ENST00000466171 ENO2P09104 434 aaPredicted RBP3.77□□□□□ -1.81
CCDC93-205ENST00000466171 LCP1P13796 627 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 MAP4K2Q12851 820 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 R3HDM1Q15032 1099 aaKnown RBP3.77□□□□□ -1.81
CCDC93-205ENST00000466171 CRB2Q5IJ48 1285 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 EEPD1Q7L9B9 569 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 REXO1L1PQ8IX06 675 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 DTX3Q8N9I9 347 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 NUDT10Q8NFP7 164 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 NUDT11Q96G61 164 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 AJUBAQ96IF1 538 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 MEGF9Q9H1U4 602 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 GPR27Q9NS67 375 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 ARHGAP20Q9P2F6 1191 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 SLC4A7Q9Y6M7 1214 aa3.77□□□□□ -1.81
CCDC93-205ENST00000466171 SLC27A2O14975 620 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 KLHL18O94889 574 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 CNOT4O95628 575 aaKnown RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 COL6A1P12109 1028 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 FAHP16930 419 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 ATF4P18848 351 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 TGM1P22735 817 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 GRIN1Q05586 938 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 SPIRE1Q08AE8 756 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 SF1Q15637 639 aaKnown RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 NRN1LQ496H8 165 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 PAN2Q504Q3 1202 aaKnown RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 SLC35F1Q5T1Q4 408 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 RSPO2Q6UXX9 243 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 PIP4K2CQ8TBX8 421 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 WWC2-AS2Q96NR7 200 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 LRRC37BQ96QE4 947 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 ADOQ96SZ5 270 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 JAM3Q9BX67 310 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 ACBD3Q9H3P7 528 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 PRKAG3Q9UGI9 489 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 ZFP69BQ9UJL9 534 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms