RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 MFSD10Q14728 455 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.45
NPHP3-203ENST00000465756 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 TBC1D5Q92609 795 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 UBIAD1Q9Y5Z9 338 aa12.21□□□□□ -0.45
NPHP3-203ENST00000465756 H0YGN5 161 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 GAS7O60861 476 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 PPP1R11O60927 126 aaPredicted RBP12.21□□□□□ -0.46
NPHP3-203ENST00000465756 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 SLFN12Q8IYM2 578 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.46
NPHP3-203ENST00000465756 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 NCOA5Q9HCD5 579 aaKnown RBP12.2□□□□□ -0.46
NPHP3-203ENST00000465756 MEIS2O14770 477 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
NPHP3-203ENST00000465756 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 NEK8Q86SG6 692 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 LRRC26Q2I0M4 334 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 TAF2Q6P1X5 1199 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 RIT2Q99578 217 aa12.2□□□□□ -0.46
NPHP3-203ENST00000465756 BMP8BP34820 402 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 PURAQ00577 322 aaKnown RBP12.19□□□□□ -0.46
NPHP3-203ENST00000465756 SP4Q02446 784 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 ARHGAP1Q07960 439 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 ZNF746Q6NUN9 644 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-203ENST00000465756 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 EMSYQ7Z589 1322 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 WDR64B1ANS9 1081 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 BMP15O95972 392 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 TMOD1P28289 359 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 KCNJ6P48051 423 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 CDC42EP1Q00587 391 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 LY6KQ17RY6 165 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 FAM20AQ96MK3 541 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-203ENST00000465756 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
NPHP3-203ENST00000465756 H3BRB1 525 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 FUT2Q10981 343 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 BECN1Q14457 450 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 SESTD1Q86VW0 696 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 CCDC83Q8IWF9 413 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
NPHP3-203ENST00000465756 TBX3O15119 743 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 SCRN1Q12765 414 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 NBPF20Q3BBV1 942 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 PRR16Q569H4 304 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPHP3-203ENST00000465756 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
NPHP3-203ENST00000465756 DNM2P50570 870 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 PTK7Q13308 1070 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
NPHP3-203ENST00000465756 HBP1O60381 514 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 TIMP1P01033 207 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 CIITAP33076 1130 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 PPFIA1Q13136 1202 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 PTGISQ16647 500 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 KIAA0753Q2KHM9 967 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 C8orf34Q49A92 452 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
NPHP3-203ENST00000465756 IPO5O00410 1097 aaKnown RBP12.17□□□□□ -0.46
NPHP3-203ENST00000465756 MAGEB2O15479 319 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 LGALS2P05162 132 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 LENG1Q96BZ8 264 aaPredicted RBP12.17□□□□□ -0.46
NPHP3-203ENST00000465756 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
NPHP3-203ENST00000465756 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
NPHP3-203ENST00000465756 NRCAMQ92823 1304 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 MEIS1O00470 390 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 STAT5BP51692 787 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 NTRK3Q16288 839 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 MSRAQ9UJ68 235 aa12.17□□□□□ -0.46
NPHP3-203ENST00000465756 COL1A2P08123 1366 aa12.16□□□□□ -0.46
NPHP3-203ENST00000465756 F2P00734 622 aa12.16□□□□□ -0.46
NPHP3-203ENST00000465756 RAB30Q15771 203 aa12.16□□□□□ -0.46
NPHP3-203ENST00000465756 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
NPHP3-203ENST00000465756 PDXDC2PQ6P474 469 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms