RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 LAMTOR5O43504 91 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 DLX3O60479 287 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 MSCO60682 206 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 CYP1A1P04798 512 aaPredicted RBP4.61□□□□□ -1.67
SNX4-202ENST00000465505 GNL2Q13823 731 aaKnown RBP4.61□□□□□ -1.67
SNX4-202ENST00000465505 SURF1Q15526 300 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 GLB1LQ6UWU2 654 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 PHOSPHO1Q8TCT1 267 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 ZCCHC14Q8WYQ9 949 aaKnown RBP4.61□□□□□ -1.67
SNX4-202ENST00000465505 KCTD13Q8WZ19 329 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 JAM3Q9BX67 310 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 TMEM168Q9H0V1 697 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 L2HGDHQ9H9P8 463 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 SLC6A20Q9NP91 592 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 GPR27Q9NS67 375 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 ASH2LQ9UBL3 628 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 CROTQ9UKG9 612 aa4.61□□□□□ -1.67
SNX4-202ENST00000465505 AGRPO00253 132 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CYP7B1O75881 506 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CLSTN1O94985 981 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 ARID5AQ03989 594 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CYP4F22Q6NT55 531 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 PKN3Q6P5Z2 889 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 PROSER1Q86XN7 944 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 MCF2L2Q86YR7 1114 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CELF2-AS1Q8N7Q2 184 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CHST13Q8NET6 341 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 CLEC4DQ8WXI8 215 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 DVL3Q92997 716 aaPredicted RBP4.6□□□□□ -1.67
SNX4-202ENST00000465505 TMEM209Q96SK2 561 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 IER2Q9BTL4 223 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 ST7Q9NRC1 585 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 PPARGC1AQ9UBK2 798 aaKnown RBP4.6□□□□□ -1.67
SNX4-202ENST00000465505 ST6GALNAC2Q9UJ37 374 aa4.6□□□□□ -1.67
SNX4-202ENST00000465505 KRIT1O00522 736 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 MAFKO60675 156 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 COL6A1P12109 1028 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PPP2CBP62714 309 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PPP2CAP67775 309 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 ZXDAP98168 799 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 RSPO2Q6UXX9 243 aaPredicted RBP4.59□□□□□ -1.67
SNX4-202ENST00000465505 TMC5Q6UXY8 1006 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PLEKHH3Q7Z736 793 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 TRIM48Q8IWZ4 208 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 KBTBD2Q8IY47 623 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PIP4K2CQ8TBX8 421 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 IGDCC4Q8TDY8 1250 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 TINF2Q9BSI4 451 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PHF20Q9BVI0 1012 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
SNX4-202ENST00000465505 PDGFDQ9GZP0 370 aaPredicted RBP4.59□□□□□ -1.67
SNX4-202ENST00000465505 NPEPPSL1A6NEC2 478 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 SLC27A2O14975 620 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 GPR42O15529 346 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 KLF4O43474 513 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 AKAP8O43823 692 aaKnown RBP4.58□□□□□ -1.68
SNX4-202ENST00000465505 TCF3P15923 654 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 EPHB4P54760 987 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 NFATC3Q12968 1075 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 ICAM4Q14773 271 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 CDSNQ15517 529 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 OTOP3Q7RTS5 596 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 RBM12BQ8IXT5 1001 aaKnown RBP4.58□□□□□ -1.68
SNX4-202ENST00000465505 KLHL36Q8N4N3 616 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 DNERQ8NFT8 737 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 TTLL11Q8NHH1 800 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
SNX4-202ENST00000465505 SGSM3Q96HU1 749 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 WRNIP1Q96S55 665 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 CD248Q9HCU0 757 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 FTSJ1Q9UET6 329 aa4.58□□□□□ -1.68
SNX4-202ENST00000465505 B4GALT4O60513 344 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 CKMP06732 381 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 COL6A2P12110 1019 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 GRIN1Q05586 938 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 HSP90AA2PQ14568 343 aaPredicted RBP4.57□□□□□ -1.68
SNX4-202ENST00000465505 NTRK3Q16288 839 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 DDR2Q16832 855 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 TRMT10BQ6PF06 316 aaKnown RBP4.57□□□□□ -1.68
SNX4-202ENST00000465505 KCNT2Q6UVM3 1135 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 ANKS3Q6ZW76 656 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 USP53Q70EK8 1073 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 DTX3Q8N9I9 347 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 NUDT10Q8NFP7 164 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 DCAF4Q8WV16 495 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 NUDT11Q96G61 164 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 GMLQ99445 158 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 PTPN18Q99952 460 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 BARX1Q9HBU1 254 aaPredicted RBP4.57□□□□□ -1.68
SNX4-202ENST00000465505 ADAM29Q9UKF5 820 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 ZDHHC9Q9Y397 364 aa4.57□□□□□ -1.68
SNX4-202ENST00000465505 KLHL18O94889 574 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 LTFP02788 710 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 FGFR1P11362 822 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 FAHP16930 419 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 TUSC3Q13454 348 aa4.56□□□□□ -1.68
SNX4-202ENST00000465505 PAN2Q504Q3 1202 aaKnown RBP4.56□□□□□ -1.68
SNX4-202ENST00000465505 HABP4Q5JVS0 413 aaKnown RBP4.56□□□□□ -1.68
SNX4-202ENST00000465505 PHF19Q5T6S3 580 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms