RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 NPFFR2Q9Y5X5 522 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 DDX3XO00571 662 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS8-217ENST00000465213 PDPK1O15530 556 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 LAMTOR5O43504 91 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 B4GALT3O60512 393 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 ZNF28P17035 718 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 CDSNQ15517 529 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 MROH9Q5TGP6 573 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 KCTD13Q8WZ19 329 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 OSBP2Q969R2 916 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 AARSD1Q9BTE6 412 aaKnown RBP6.21□□□□□ -1.42
VPS8-217ENST00000465213 SIRPGQ9P1W8 387 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 X6R8D5 127 aa6.21□□□□□ -1.42
VPS8-217ENST00000465213 CCDC85CA6NKD9 419 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PRODHO43272 600 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 FSHBP01225 129 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 FGFR1P11362 822 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PABPC1P11940 636 aaKnown RBP6.2□□□□□ -1.42
VPS8-217ENST00000465213 TACR2P21452 398 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 FPR2P25090 351 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 ADAM9Q13443 819 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 CR1LQ2VPA4 569 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
VPS8-217ENST00000465213 CEP68Q76N32 757 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 LIMS2Q7Z4I7 341 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PLEKHH3Q7Z736 793 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 LRRC47Q8N1G4 583 aaKnown RBP6.2□□□□□ -1.42
VPS8-217ENST00000465213 MBD6Q96DN6 1003 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PPP4R1LQ9P1A2 415 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 ST6GALNAC2Q9UJ37 374 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PCDHA2Q9Y5H9 948 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 ZNF536O15090 1300 aa6.2□□□□□ -1.42
VPS8-217ENST00000465213 PPM1GO15355 546 aaPredicted RBP6.19□□□□□ -1.42
VPS8-217ENST00000465213 MYO1BO43795 1136 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 ADCY3O60266 1144 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 C6P13671 934 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 GTF2A2P52657 109 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 NTRK3Q16288 839 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 PKN3Q6P5Z2 889 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 NSMFQ6X4W1 530 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 MILR1Q7Z6M3 343 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 STK32CQ86UX6 486 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 DNERQ8NFT8 737 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
VPS8-217ENST00000465213 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 MSCO60682 206 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 LSAMPQ13449 338 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
VPS8-217ENST00000465213 MTERF2Q49AM1 385 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 CRIP3Q6Q6R5 217 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 Q8N1X5 172 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 UBE2Q2Q8WVN8 375 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 KISS1RQ969F8 398 aaPredicted RBP6.18□□□□□ -1.42
VPS8-217ENST00000465213 TRMT2BQ96GJ1 504 aaKnown RBP6.18□□□□□ -1.42
VPS8-217ENST00000465213 TMEM169Q96HH4 297 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 YTHDC1Q96MU7 727 aaKnown RBP6.18□□□□□ -1.42
VPS8-217ENST00000465213 CDIP1Q9H305 208 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 CD248Q9HCU0 757 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 PFDN2Q9UHV9 154 aa6.18□□□□□ -1.42
VPS8-217ENST00000465213 FAM221BA6H8Z2 402 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
VPS8-217ENST00000465213 STAT5AP42229 794 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 EPHB4P54760 987 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 NKX3-2P78367 333 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 RASA3Q14644 834 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 ICAM4Q14773 271 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 SPRED1Q7Z699 444 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 SH3RF3Q8TEJ3 882 aaPredicted RBP6.17□□□□□ -1.42
VPS8-217ENST00000465213 CDK5RAP1Q96SZ6 601 aaKnown RBP6.17□□□□□ -1.42
VPS8-217ENST00000465213 PHF20Q9BVI0 1012 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 SCAND2PQ9GZW5 306 aaPredicted RBP6.17□□□□□ -1.42
VPS8-217ENST00000465213 GPR27Q9NS67 375 aa6.17□□□□□ -1.42
VPS8-217ENST00000465213 BLACEA4D250 179 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 H7BY64 318 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 CYR61O00622 381 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 ACVRL1P37023 503 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 GDF5P43026 501 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 SSRP1Q08945 709 aaKnown RBP6.16□□□□□ -1.42
VPS8-217ENST00000465213 KCNT2Q6UVM3 1135 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 LRP10Q7Z4F1 713 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 DHX37Q8IY37 1157 aaKnown RBP6.16□□□□□ -1.42
VPS8-217ENST00000465213 ZBTB38Q8NAP3 1195 aaPredicted RBP6.16□□□□□ -1.42
VPS8-217ENST00000465213 DCAF4Q8WV16 495 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 CHAMP1Q96JM3 812 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 DEPDC7Q96QD5 511 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 CLDND1Q9NY35 253 aa6.16□□□□□ -1.42
VPS8-217ENST00000465213 GPR42O15529 346 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 IFRD2Q12894 506 aaPredicted RBP6.15□□□□□ -1.42
VPS8-217ENST00000465213 CHRNA2Q15822 529 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 FOXB2Q5VYV0 432 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 RSPO2Q6UXX9 243 aaPredicted RBP6.15□□□□□ -1.42
VPS8-217ENST00000465213 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
VPS8-217ENST00000465213 SNTG2Q9NY99 539 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 DTLQ9NZJ0 730 aa6.15□□□□□ -1.42
VPS8-217ENST00000465213 CYP7B1O75881 506 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms