RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 SLC43A3Q8NBI5 491 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 LENG9Q96B70 501 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 RIT2Q99578 217 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 AGO4Q9HCK5 861 aaKnown RBP15.57■□□□□ 0.08
LIMD1-203ENST00000465039 JPH1Q9HDC5 661 aaPredicted RBP15.57■□□□□ 0.08
LIMD1-203ENST00000465039 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 NR2E3Q9Y5X4 410 aa15.57■□□□□ 0.08
LIMD1-203ENST00000465039 IPO5O00410 1097 aaKnown RBP15.56■□□□□ 0.08
LIMD1-203ENST00000465039 ADAMTS3O15072 1205 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 TBX3O15119 743 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
LIMD1-203ENST00000465039 TRAPPC10P48553 1259 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 BEX3Q00994 111 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 HSDL1Q3SXM5 330 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 CXCL17Q6UXB2 119 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 SESTD1Q86VW0 696 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 PLA2G4DQ86XP0 818 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 HSCBQ8IWL3 235 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 COPS5Q92905 334 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
LIMD1-203ENST00000465039 TNRC18O15417 2968 aaPredicted RBP15.56■□□□□ 0.08
LIMD1-203ENST00000465039 ALPK3Q96L96 1907 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 EMSYQ7Z589 1322 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 U2AF2P26368 475 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIMD1-203ENST00000465039 CDK7P50613 346 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 KRT76Q01546 638 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 PRR16Q569H4 304 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 CYFIP1Q7L576 1253 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 SMAP1Q8IYB5 467 aaPredicted RBP15.55■□□□□ 0.08
LIMD1-203ENST00000465039 CYP2W1Q8TAV3 490 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 OXER1Q8TDS5 423 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 GPR20Q99678 358 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 SLC9A2Q9UBY0 812 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 TCEAL9Q9UHQ7 104 aa15.55■□□□□ 0.08
LIMD1-203ENST00000465039 ZNF215Q9UL58 517 aaPredicted RBP15.55■□□□□ 0.08
LIMD1-203ENST00000465039 BTBD18B2RXH4 712 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 ARVCFO00192 962 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 EVI5O60447 810 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 ATP9AO75110 1047 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 GJB2P29033 226 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 SLC26A2P50443 739 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 NR5A1Q13285 461 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 INF2Q27J81 1249 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 LRRC26Q2I0M4 334 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 ZNF746Q6NUN9 644 aaPredicted RBP15.54■□□□□ 0.08
LIMD1-203ENST00000465039 NOSTRINQ8IVI9 506 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 RDM1Q8NG50 284 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 SEPT1Q8WYJ6 367 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 ZNF577Q9BSK1 485 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
LIMD1-203ENST00000465039 HAS3O00219 553 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 DHX15O43143 795 aaKnown RBP15.53■□□□□ 0.08
LIMD1-203ENST00000465039 EDIL3O43854 480 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 MYL3P08590 195 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 ARP10275 920 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 RTP1P59025 263 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 ITGB3BPQ13352 177 aaPredicted RBP15.53■□□□□ 0.08
LIMD1-203ENST00000465039 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 SLC5A5Q92911 643 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
LIMD1-203ENST00000465039 FERMT2Q96AC1 680 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
LIMD1-203ENST00000465039 KCNMB3Q9NPA1 279 aa15.53■□□□□ 0.08
LIMD1-203ENST00000465039 DDX25Q9UHL0 483 aaKnown RBP15.53■□□□□ 0.08
LIMD1-203ENST00000465039 DCDC2CA8MYV0 355 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 TLR3O15455 904 aaKnown RBP15.52■□□□□ 0.08
LIMD1-203ENST00000465039 LGR5O75473 907 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 ATG7O95352 703 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 LGALS2P05162 132 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 SUPT20HL2P0C7V6 817 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 PTGS1P23219 599 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 SFNP31947 248 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
LIMD1-203ENST00000465039 GNL2Q13823 731 aaKnown RBP15.52■□□□□ 0.08
LIMD1-203ENST00000465039 LETM2Q2VYF4 491 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 ETNPPLQ8TBG4 499 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 KAT2BQ92831 832 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 C16orf70Q9BSU1 422 aa15.52■□□□□ 0.08
LIMD1-203ENST00000465039 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
LIMD1-203ENST00000465039 IGKV6D-21A0A0A0MT36 114 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 H3BQV1 296 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 H3BRB1 525 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 MSH4O15457 936 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 TDP2O95551 362 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 TCF7P36402 384 aaPredicted RBP15.51■□□□□ 0.07
LIMD1-203ENST00000465039 JAK3P52333 1124 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 ACTR2P61160 394 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 PLPPR4Q7Z2D5 763 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 FAM126BQ8IXS8 530 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 AFAP1L1Q8TED9 768 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 DPF3Q92784 378 aa15.51■□□□□ 0.07
LIMD1-203ENST00000465039 VTI1AQ96AJ9 217 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms