RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 FAM122AQ96E09 287 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 PDGFCQ9NRA1 345 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 KCNJ14Q9UNX9 436 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 SPDYE3A6NKU9 549 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 TLR3O15455 904 aaKnown RBP23.8■■□□□ 1.4
CD58-204ENST00000464088 STXBP2Q15833 593 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 CCDC144BQ3MJ40 725 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 GALNT17Q6IS24 598 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 REXO1Q8N1G1 1221 aaKnown RBP23.8■■□□□ 1.4
CD58-204ENST00000464088 BICD2Q8TD16 824 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 PGBD1Q96JS3 809 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 ANO3Q9BYT9 981 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 PPP1R12CQ9BZL4 782 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 SPC25Q9HBM1 224 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 CXXC1Q9P0U4 656 aaPredicted RBP23.8■■□□□ 1.4
CD58-204ENST00000464088 PCDHA4Q9UN74 947 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 MYH7BA7E2Y1 1941 aa23.8■■□□□ 1.4
CD58-204ENST00000464088 EIF3JO75822 258 aaKnown RBP23.79■■□□□ 1.4
CD58-204ENST00000464088 RGS20O76081 388 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 XBP1P17861 261 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 IGFBP4P22692 258 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 CCND2P30279 289 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 MRPS9P82933 396 aaKnown RBP23.79■■□□□ 1.4
CD58-204ENST00000464088 JAKMIP3Q5VZ66 844 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 VTI1AQ96AJ9 217 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 MTIF3Q9H2K0 278 aaKnown RBP23.79■■□□□ 1.4
CD58-204ENST00000464088 NKX2-4Q9H2Z4 354 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 SLC28A3Q9HAS3 691 aa23.79■■□□□ 1.4
CD58-204ENST00000464088 TCF20Q9UGU0 1960 aaKnown RBP23.79■■□□□ 1.4
CD58-204ENST00000464088 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.78■■□□□ 1.4
CD58-204ENST00000464088 CTAGE5O15320 804 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 MYCLP12524 364 aaPredicted RBP23.78■■□□□ 1.4
CD58-204ENST00000464088 GNASQ5JWF2 1037 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 PCNX4Q63HM2 1172 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 MCTP2Q6DN12 878 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 XRRA1Q6P2D8 792 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 BLIDQ8IZY5 108 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 RASGRP4Q8TDF6 673 aa23.78■■□□□ 1.4
CD58-204ENST00000464088 YBX2Q9Y2T7 364 aaKnown RBP23.78■■□□□ 1.4
CD58-204ENST00000464088 TRANK1O15050 2925 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 K7ELQ4 463 aaPredicted RBP23.77■■□□□ 1.4
CD58-204ENST00000464088 FGBP02675 491 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 BMP1P13497 986 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 CYP2C18P33260 490 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 SREBF1P36956 1147 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 TMEM63BQ5T3F8 832 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 IQSEC1Q6DN90 963 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 CRYGNQ8WXF5 182 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 ZFP91Q96JP5 570 aaPredicted RBP23.77■■□□□ 1.4
CD58-204ENST00000464088 C1QTNF1Q9BXJ1 281 aa23.77■■□□□ 1.4
CD58-204ENST00000464088 TSPYL2Q9H2G4 693 aaPredicted RBP23.77■■□□□ 1.4
CD58-204ENST00000464088 SMPD1P17405 629 aa23.76■■□□□ 1.39
CD58-204ENST00000464088 INPP4AQ96PE3 977 aaPredicted RBP23.76■■□□□ 1.39
CD58-204ENST00000464088 EHMT1Q9H9B1 1298 aa23.76■■□□□ 1.39
CD58-204ENST00000464088 GNEQ9Y223 722 aaKnown RBP23.76■■□□□ 1.39
CD58-204ENST00000464088 STAM2O75886 525 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 HOXD11P31277 338 aaPredicted RBP23.75■■□□□ 1.39
CD58-204ENST00000464088 TNFAIP2Q03169 654 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 KRT40Q6A162 431 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 CCDC62Q6P9F0 684 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 SCFD2Q8WU76 684 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 WDR11Q9BZH6 1224 aa23.75■■□□□ 1.39
CD58-204ENST00000464088 ARIH1Q9Y4X5 557 aaPredicted RBP23.75■■□□□ 1.39
CD58-204ENST00000464088 ARIH2O95376 493 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 MMP1P03956 469 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 PTGS1P23219 599 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 DUSP28Q4G0W2 176 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 SEPT14Q6ZU15 432 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 FAM184AQ8NB25 1140 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 OXER1Q8TDS5 423 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.74■■□□□ 1.39
CD58-204ENST00000464088 UBIAD1Q9Y5Z9 338 aa23.74■■□□□ 1.39
CD58-204ENST00000464088 EDIL3O43854 480 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 CYP3A4P08684 503 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 FOSBP53539 338 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 ARHGAP4P98171 946 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 SEMA3FQ13275 785 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 TNFRSF25Q93038 417 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 C8orf76Q96K31 380 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 SEZ6LQ9BYH1 1024 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 HIPK3Q9H422 1215 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 RTEL1Q9NZ71 1219 aa23.73■■□□□ 1.39
CD58-204ENST00000464088 CABYRO75952 493 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 ITGB5P18084 799 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 GJB2P29033 226 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 ICAM3P32942 547 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 TRIM29Q14134 588 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 TTLL4Q14679 1199 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 AAK1Q2M2I8 961 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 OTOP2Q7RTS6 562 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 FBXO18Q8NFZ0 1043 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 NECAB3Q96P71 396 aaPredicted RBP23.72■■□□□ 1.39
CD58-204ENST00000464088 DDX41Q9UJV9 622 aaKnown RBP23.72■■□□□ 1.39
CD58-204ENST00000464088 SMC3Q9UQE7 1217 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 Q9Y3F1 56 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 PCDHA11Q9Y5I1 949 aa23.72■■□□□ 1.39
CD58-204ENST00000464088 UMODL1Q5DID0 1318 aa23.71■■□□□ 1.39
CD58-204ENST00000464088 TXNP10599 105 aaKnown RBP23.71■■□□□ 1.39
CD58-204ENST00000464088 POU3F3P20264 500 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms