RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 LGALS2P05162 132 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 KCNA5P22460 613 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 SLC35G1Q2M3R5 365 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 RIOX1Q9H6W3 641 aa20.05■□□□□ 0.8
HMGN1-210ENST00000464078 BAZ2BQ9UIF8 2168 aaKnown RBP20.04■□□□□ 0.8
HMGN1-210ENST00000464078 GCOM1H8Y6P7 765 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-210ENST00000464078 STAM2O75886 525 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 POLR2MP0CAP2 368 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 SMIM10L2AP0DMW4 78 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 SMIM10L2BP0DMW5 78 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 GRM4Q14833 912 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 COL19A1Q14993 1142 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 PTPROQ16827 1216 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-210ENST00000464078 SEPT8Q92599 483 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 INPP4AQ96PE3 977 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-210ENST00000464078 MLXIPQ9HAP2 919 aa20.04■□□□□ 0.8
HMGN1-210ENST00000464078 SORBS3O60504 671 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 ICAM3P32942 547 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 PUS10Q3MIT2 529 aaKnown RBP20.03■□□□□ 0.8
HMGN1-210ENST00000464078 GNPTABQ3T906 1256 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 EPC2Q52LR7 807 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 METTL7BQ6UX53 244 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 CYB5R4Q7L1T6 521 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 GJD3Q8N144 294 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 NEK9Q8TD19 979 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.82e-6■■■■□ 20.4
HMGN1-210ENST00000464078 TOP1MTQ969P6 601 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 USP26Q9BXU7 913 aa20.03■□□□□ 0.8
HMGN1-210ENST00000464078 H3BNC9 293 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 NOP56O00567 594 aaKnown RBP20.02■□□□□ 0.8
HMGN1-210ENST00000464078 TREHO43280 583 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 PTCRAQ6ISU1 281 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-210ENST00000464078 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 PIGSQ96S52 555 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 IL25Q9H293 177 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 RNPEPQ9H4A4 650 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 DOCK5Q9H7D0 1870 aa20.02■□□□□ 0.8
HMGN1-210ENST00000464078 PNMA6FA0A0J9YX94 578 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-210ENST00000464078 FAM86C2PA6NEL3 165 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 GRXCR2A6NFK2 248 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 RBAK-RBAKDNI3L0D1 243 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 CYTH3O43739 400 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 MRPS9P82933 396 aaKnown RBP20.01■□□□□ 0.79
HMGN1-210ENST00000464078 NEDD9Q14511 834 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 FCHSD1Q86WN1 690 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 APBB2Q92870 758 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 YME1L1Q96TA2 773 aa20.01■□□□□ 0.79
HMGN1-210ENST00000464078 ATG2AQ2TAZ0 1938 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 PRR33A8MZF0 331 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 SPATA31C2B4DYI2 1134 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 FIBPO43427 364 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 CTSHP09668 335 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 GNAT1P11488 350 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 IL9P15248 144 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 ADAM17P78536 824 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 TROAPQ12815 778 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 TRDNQ13061 729 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 BANK1Q8NDB2 785 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 GPR20Q99678 358 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 BCAS3Q9H6U6 928 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
HMGN1-210ENST00000464078 MYO7AQ13402 2215 aa20■□□□□ 0.79
HMGN1-210ENST00000464078 IGHDP01880 384 aa19.99■□□□□ 0.79
HMGN1-210ENST00000464078 SEMA3FQ13275 785 aa19.99■□□□□ 0.79
HMGN1-210ENST00000464078 FAM26DQ5JW98 314 aa19.99■□□□□ 0.79
HMGN1-210ENST00000464078 TMEM192Q8IY95 271 aa19.99■□□□□ 0.79
HMGN1-210ENST00000464078 PABPC5Q96DU9 382 aaKnown RBP19.99■□□□□ 0.79
HMGN1-210ENST00000464078 ZFP91Q96JP5 570 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-210ENST00000464078 IFIH1Q9BYX4 1025 aaKnown RBP19.99■□□□□ 0.79
HMGN1-210ENST00000464078 OSBPL7Q9BZF2 842 aa19.99■□□□□ 0.79
HMGN1-210ENST00000464078 ALADP13716 330 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 GPM6BQ13491 265 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 XRRA1Q6P2D8 792 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 CYFIP1Q7L576 1253 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 RPAINQ86UA6 219 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 TRIM50Q86XT4 487 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 LMBR1Q8WVP7 490 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 SENP7Q9BQF6 1050 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 NSUN3Q9H649 340 aaKnown RBP19.98■□□□□ 0.79
HMGN1-210ENST00000464078 SETD4Q9NVD3 440 aa19.98■□□□□ 0.79
HMGN1-210ENST00000464078 C5orf67F2Z3F1 127 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 SSTR3P32745 418 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-210ENST00000464078 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 PRKAG3Q9UGI9 489 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 FAM50BQ9Y247 325 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-210ENST00000464078 NRCAMQ92823 1304 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 KAT6AQ92794 2004 aa19.97■□□□□ 0.79
HMGN1-210ENST00000464078 ERICH2A1L162 156 aa19.96■□□□□ 0.79
HMGN1-210ENST00000464078 IFIT3O14879 490 aaKnown RBP19.96■□□□□ 0.79
HMGN1-210ENST00000464078 CYP21A2P08686 494 aa19.96■□□□□ 0.79
HMGN1-210ENST00000464078 SART3Q15020 963 aaKnown RBP19.96■□□□□ 0.79
HMGN1-210ENST00000464078 TCEAL5Q5H9L2 206 aa19.96■□□□□ 0.79
HMGN1-210ENST00000464078 RC3H2Q9HBD1 1191 aaKnown RBP19.96■□□□□ 0.79
HMGN1-210ENST00000464078 SENP2Q9HC62 589 aa19.96■□□□□ 0.79
HMGN1-210ENST00000464078 H3BQ06 376 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms