RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 PIP4K2CQ8TBX8 421 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 SAMD11Q96NU1 681 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 ZFYVE21Q9BQ24 234 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 TMEM168Q9H0V1 697 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 PODXL2Q9NZ53 605 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
ITGB1-208ENST00000464001 PABPC1P11940 636 aaKnown RBP6.62□□□□□ -1.35
ITGB1-208ENST00000464001 SPIRE1Q08AE8 756 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 RAB33AQ14088 237 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 KIZQ2M2Z5 673 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 LBX2Q6XYB7 198 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 DPH6Q7L8W6 267 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
ITGB1-208ENST00000464001 TTLL11Q8NHH1 800 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
ITGB1-208ENST00000464001 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 ARHGEF4Q9NR80 690 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 MYRFQ9Y2G1 1151 aa6.62□□□□□ -1.35
ITGB1-208ENST00000464001 TRAV20A0A0B4J274 112 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 SLC27A2O14975 620 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 INSRRP14616 1297 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-208ENST00000464001 ADAM17P78536 824 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 IFRD2Q12894 506 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-208ENST00000464001 TMC5Q6UXY8 1006 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 IFNL3Q8IZI9 196 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 TTC9BQ8N6N2 239 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 ZNF669Q96BR6 464 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-208ENST00000464001 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 PPARGC1AQ9UBK2 798 aaKnown RBP6.61□□□□□ -1.35
ITGB1-208ENST00000464001 FTSJ1Q9UET6 329 aa6.61□□□□□ -1.35
ITGB1-208ENST00000464001 GNAT1P11488 350 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 GRK2P25098 689 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 GRK3P35626 688 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-208ENST00000464001 GPR85P60893 370 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
ITGB1-208ENST00000464001 KCNT2Q6UVM3 1135 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 CLEC4DQ8WXI8 215 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
ITGB1-208ENST00000464001 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
ITGB1-208ENST00000464001 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 B4GALT3O60512 393 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
ITGB1-208ENST00000464001 GRIN1Q05586 938 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 TUSC3Q13454 348 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 NTRK3Q16288 839 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 STYK1Q6J9G0 422 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 CKAP2LQ8IYA6 745 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 KLHL36Q8N4N3 616 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 CHST13Q8NET6 341 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
ITGB1-208ENST00000464001 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
ITGB1-208ENST00000464001 KCNJ15Q99712 375 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 WASF3Q9UPY6 502 aa6.59□□□□□ -1.35
ITGB1-208ENST00000464001 FAM47E-STBD1D6RA91 191 aa6.58□□□□□ -1.36
ITGB1-208ENST00000464001 COL6A2P12110 1019 aa6.58□□□□□ -1.36
ITGB1-208ENST00000464001 PUM1Q14671 1186 aaKnown RBP eCLIP6.58□□□□□ -1.36
ITGB1-208ENST00000464001 PAN2Q504Q3 1202 aaKnown RBP6.58□□□□□ -1.36
ITGB1-208ENST00000464001 CPZQ66K79 652 aa6.58□□□□□ -1.36
ITGB1-208ENST00000464001 UHMK1Q8TAS1 419 aaKnown RBP6.58□□□□□ -1.36
ITGB1-208ENST00000464001 BARX1Q9HBU1 254 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-208ENST00000464001 DLL4Q9NR61 685 aa6.58□□□□□ -1.36
ITGB1-208ENST00000464001 E9PSI1 815 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 SOD2P04179 222 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 FAHP16930 419 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 PKN3Q6P5Z2 889 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 PROSER1Q86XN7 944 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
ITGB1-208ENST00000464001 DTX3Q8N9I9 347 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 MBD6Q96DN6 1003 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 C8orf49Q96NF6 230 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-208ENST00000464001 PDGFDQ9GZP0 370 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-208ENST00000464001 IGSF5Q9NSI5 407 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 DSEQ9UL01 958 aa6.57□□□□□ -1.36
ITGB1-208ENST00000464001 BLACEA4D250 179 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 NPEPPSL1A6NEC2 478 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 FBXO21O94952 628 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 CHGBP05060 677 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 CKMP06732 381 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 ENO2P09104 434 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-208ENST00000464001 PPP2CBP62714 309 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 PPP2CAP67775 309 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 NFATC3Q12968 1075 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 HABP4Q5JVS0 413 aaKnown RBP6.56□□□□□ -1.36
ITGB1-208ENST00000464001 ARHGEF18Q6ZSZ5 1173 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 LIMS2Q7Z4I7 341 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-208ENST00000464001 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 SPATA9Q9BWV2 254 aa6.56□□□□□ -1.36
ITGB1-208ENST00000464001 C1QTNF3Q9BXJ4 246 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms