RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 RTN1Q16799 776 aa25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 TCEANC2Q96MN5 208 aa25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 SENP7Q9BQF6 1050 aa25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 ZNF215Q9UL58 517 aaPredicted RBP25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 FGD1P98174 961 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 EXOSC10Q01780 885 aaKnown RBP25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 UBE2SQ16763 222 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 CNKSR3Q6P9H4 555 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 RASEFQ8IZ41 740 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 GPRASP2Q96D09 838 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 GPR20Q99678 358 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 TET1Q8NFU7 2136 aa25.45■■□□□ 1.66
PDLIM7-206ENST00000463411 KIF28PB7ZC32 967 aa25.44■■□□□ 1.66
PDLIM7-206ENST00000463411 MYOGP15173 224 aa25.44■■□□□ 1.66
PDLIM7-206ENST00000463411 ADCK5Q3MIX3 580 aa25.44■■□□□ 1.66
PDLIM7-206ENST00000463411 PPP1R18Q6NYC8 613 aa25.44■■□□□ 1.66
PDLIM7-206ENST00000463411 BCAS3Q9H6U6 928 aa25.44■■□□□ 1.66
PDLIM7-206ENST00000463411 KLF18A0A0U1RQI7 1052 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 GOLGA8AA7E2F4 631 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 GOLGA8BA8MQT2 603 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 SMIM10L2AP0DMW4 78 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 SMIM10L2BP0DMW5 78 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 NAPAP54920 295 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 ZNF200P98182 395 aaPredicted RBP25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 SP4Q02446 784 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 SERINC5Q86VE9 423 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 HERC6Q8IVU3 1022 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 ATP6V0A1Q93050 837 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 BRPF3Q9ULD4 1205 aa25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 NAP1L2Q9ULW6 460 aaPredicted RBP25.43■■□□□ 1.66
PDLIM7-206ENST00000463411 EMSYQ7Z589 1322 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 hCG_1984214I3L0E3 225 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 CXCL10P02778 98 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 CA3P07451 260 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 GNAT1P11488 350 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 IGFBP4P22692 258 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 RCAN1P53805 252 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 TRIM71Q2Q1W2 868 aaKnown RBP25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 ZNF618Q5T7W0 954 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 UTP14CQ5TAP6 766 aaKnown RBP25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 WWC2Q6AWC2 1192 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 TEX2Q8IWB9 1127 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 ZNF713Q8N859 430 aaPredicted RBP25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 PCDHA6Q9UN73 950 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 PCDHA8Q9Y5H6 950 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 UNC80Q8N2C7 3258 aa25.42■■□□□ 1.66
PDLIM7-206ENST00000463411 NBNO60934 754 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 EFCAB14O75071 495 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 THPOP40225 353 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 WDR5P61964 334 aaKnown RBP25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 MTMR1Q13613 665 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 WNT8BQ93098 351 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 PTPRSQ13332 1948 aa25.41■■□□□ 1.66
PDLIM7-206ENST00000463411 HIC1Q14526 733 aa25.4■■□□□ 1.66
PDLIM7-206ENST00000463411 TRIM50Q86XT4 487 aa25.4■■□□□ 1.66
PDLIM7-206ENST00000463411 EYSQ5T1H1 3165 aa25.4■■□□□ 1.66
PDLIM7-206ENST00000463411 MYO9BQ13459 2157 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 ABHD14A-ACY1A0A1B0GW23 586 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 RSPH10B2B2RC85 870 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 TLL1O43897 1013 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 RSPH10BP0C881 870 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 ITGB5P18084 799 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 HOXC8P31273 242 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 TCF7P36402 384 aaPredicted RBP25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 ADCY7P51828 1080 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 IKBKEQ14164 716 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 GPNMBQ14956 572 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 USP38Q8NB14 1042 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 PPM1EQ8WY54 764 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 RNPEPQ9H4A4 650 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 RIC8AQ9NPQ8 531 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 UBIAD1Q9Y5Z9 338 aa25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 V9GY48 417 aaPredicted RBP25.39■■□□□ 1.66
PDLIM7-206ENST00000463411 CCDC196A0A1B0GTZ2 297 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 MAFGO15525 162 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 CAND2O75155 1236 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 REC8O95072 547 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 KCNA2P16389 499 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 ADGRE1Q14246 886 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 TRAF7Q6Q0C0 670 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 JAKMIP1Q96N16 626 aaKnown RBP25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 ZBED2Q9BTP6 218 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 COL25A1Q9BXS0 654 aaPredicted RBP25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 GLT8D2Q9H1C3 349 aa25.38■■□□□ 1.65
PDLIM7-206ENST00000463411 TREHO43280 583 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 LGR5O75473 907 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 FOSP01100 380 aaPredicted RBP25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 HSPA4P34932 840 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 METAP2P50579 478 aaKnown RBP eCLIP25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 FUT2Q10981 343 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 BLOC1S2Q6QNY1 142 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 JADE2Q9NQC1 790 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 SETD4Q9NVD3 440 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 BARHL2Q9NY43 387 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 PKD2L1Q9P0L9 805 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 KAT6AQ92794 2004 aa25.37■■□□□ 1.65
PDLIM7-206ENST00000463411 ATP9AO75110 1047 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 ARHGAP4P98171 946 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 Q6ZUG5 572 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 SEPT1Q8WYJ6 367 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms