RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PPFIA3O75145 1194 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 KCNA4P22459 653 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 TBC1D8BQ0IIM8 1120 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 SLC9C2Q5TAH2 1124 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 FAM160B2Q86V87 743 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 BORCS6Q96GS4 357 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 CCPG1Q9ULG6 757 aa15.92■□□□□ 0.14
C9orf3-211ENST00000463372 B4DLN1 442 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 ARIH2O95376 493 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 CTSHP09668 335 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 MRPL12P52815 198 aaKnown RBP15.91■□□□□ 0.14
C9orf3-211ENST00000463372 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-211ENST00000463372 TPRNQ4KMQ1 711 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 LLGL2Q6P1M3 1020 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 SSH1Q8WYL5 1049 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-211ENST00000463372 ARMT1Q9H993 441 aa15.91■□□□□ 0.14
C9orf3-211ENST00000463372 DGKIO75912 1065 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 ZIC2O95409 532 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-211ENST00000463372 PDE6AP16499 860 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 C1orf210Q8IVY1 113 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 GMCL1P1Q8NEA9 526 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 STAG1Q8WVM7 1258 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 OSBPL7Q9BZF2 842 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 CDH22Q9UJ99 828 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
C9orf3-211ENST00000463372 ZMIZ1Q9ULJ6 1067 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 RALGAPA1Q6GYQ0 2036 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 ZNF532Q9HCE3 1301 aa15.9■□□□□ 0.14
C9orf3-211ENST00000463372 KAT6AQ92794 2004 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 HAS3O00219 553 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 SPTLC1O15269 473 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 PRKAB2O43741 272 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 CAND2O75155 1236 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 F2P00734 622 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 ZNF286BP0CG31 522 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 CALML3P27482 149 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 SNAP25P60880 206 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 UBE3AQ05086 875 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 ITIH3Q06033 890 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 ARHGAP1Q07960 439 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
C9orf3-211ENST00000463372 TDGQ13569 410 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 PDE12Q6L8Q7 609 aaKnown RBP15.89■□□□□ 0.13
C9orf3-211ENST00000463372 CMTR2Q8IYT2 770 aaKnown RBP15.89■□□□□ 0.13
C9orf3-211ENST00000463372 ATP6V0A1Q93050 837 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 SYNPO2Q9UMS6 1093 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 IGF2RP11717 2491 aa15.89■□□□□ 0.13
C9orf3-211ENST00000463372 NBEAQ8NFP9 2946 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 SLC30A4O14863 429 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 GNAI3P08754 354 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 MTHFRP42898 656 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 SHC2P98077 582 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 KCNC3Q14003 757 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-211ENST00000463372 LY6KQ17RY6 165 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 LRSAM1Q6UWE0 723 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 NETO1Q8TDF5 533 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 MKL1Q969V6 931 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 ADAM7Q9H2U9 754 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 DUSP12Q9UNI6 340 aa15.88■□□□□ 0.13
C9orf3-211ENST00000463372 EDNRBP24530 442 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 PMLP29590 882 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 HIC1Q14526 733 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 CYP26B1Q9NR63 512 aa15.87■□□□□ 0.13
C9orf3-211ENST00000463372 TLR7Q9NYK1 1049 aaKnown RBP15.87■□□□□ 0.13
C9orf3-211ENST00000463372 DBR1Q9UK59 544 aaKnown RBP15.87■□□□□ 0.13
C9orf3-211ENST00000463372 HELZ2Q9BYK8 2649 aaKnown RBP15.86■□□□□ 0.13
C9orf3-211ENST00000463372 MIA3Q5JRA6 1907 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 RASA1P20936 1047 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 PAN2Q504Q3 1202 aaKnown RBP15.86■□□□□ 0.13
C9orf3-211ENST00000463372 RUFY4Q6ZNE9 571 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 SEPT14Q6ZU15 432 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 DNERQ8NFT8 737 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 CASP10Q92851 521 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 CCDC8Q9H0W5 538 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-211ENST00000463372 USTQ9Y2C2 406 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 PCDHB12Q9Y5F1 795 aa15.86■□□□□ 0.13
C9orf3-211ENST00000463372 DSPP15924 2871 aaKnown RBP15.86■□□□□ 0.13
C9orf3-211ENST00000463372 NFIBO00712 420 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 ENPP3O14638 875 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 MBD4O95243 580 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 TTLL1O95922 423 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 ICAM1P05362 532 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 DCNP07585 359 aaKnown RBP15.85■□□□□ 0.13
C9orf3-211ENST00000463372 SLC1A4P43007 532 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 RNF207Q6ZRF8 634 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 ATRIPQ8WXE1 791 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 DDX1Q92499 740 aaKnown RBP15.85■□□□□ 0.13
C9orf3-211ENST00000463372 IGSF5Q9NSI5 407 aa15.85■□□□□ 0.13
C9orf3-211ENST00000463372 SMG5Q9UPR3 1016 aaKnown RBP15.85■□□□□ 0.13
C9orf3-211ENST00000463372 PNMA6EA0A0J9YXQ4 647 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms